Query= MSMg01no407_a06.b1 MSMg01no407_a06.b1 CHROMAT_FILE:
MSMg01no407_a06.b1 PHD_FILE: MSMg01no407_a06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:32 2005
(429 letters)
>mm_chr1_77982789_77983617
Length = 829
Score = 768 bits (397), Expect = 0.0
Identities = 422/431 (97%), Gaps = 2/431 (0%)
Strand = Plus / Plus
Query: 1 cacttccttatgcacagacattattatagcattgtgtgtgaccaaacagaatctaggagc 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 201 cacttccttatgcacagacattattatagcattgtgtgtgaccaaatagaatctaggagc 260
Query: 61 cacagacaatttaaaaaagaacatgatatttgttttgctttgtttttgaacaatgtcttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cacagacaatttaaaaaagaacatgatatttgttttgctttgtttttgaacaatgtcttg 320
Query: 121 tgtcttgacctcagcgagtatctggatgatgctactggattccatactgatggtccagat 180
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 321 tgtcttgacctcagcgagtatctggatgatgctactggattccacactgatggtccagat 380
Query: 181 agaagggaattcgggggatagtctaagatcaaaaaactggcgttccttccaccagtggct 240
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaagggaattcggggggtagtctaagatcaaaaaactggcgttccttccaccagtggct 440
Query: 241 ataaatcaacaatagctcctcagccagggtagacttcatgagtctctccccaactcatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ataaatcaacaatagctcctcagccagggtagacttcatgagtctctccccaactcatgc 500
Query: 301 tgggattacagcttgtgttgatcttaacatgcacccaaggttttttcctctctctctctc 360
|||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgggattatagcttgtgttaatcttaacatgcacccaaggttttttcctctctctctctc 560
Query: 361 tctctctctctctctctctctctctctctctctctctctctctctctctctctctc--tc 418
|||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||
Sbjct: 561 tctccctctctctctctctctctctctccctctctctctctctctctctctctctcgctc 620
Query: 419 tctctctctcc 429
|||||||||||
Sbjct: 621 tctctctctcc 631
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 56
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_a06.g1 MSMg01no407_a06.g1 CHROMAT_FILE:
MSMg01no407_a06.g1 PHD_FILE: MSMg01no407_a06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:22:32 2005
(522 letters)
>mm_chr1_78134690_78135611
Length = 922
Score = 992 bits (513), Expect = 0.0
Identities = 519/521 (99%)
Strand = Plus / Minus
Query: 1 catgtgactaaatccctataaagttgaggcaagatttcatgtataatagtgttaactagg 60
|||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||
Sbjct: 659 catgtgactaaatccctataaacttgaggcgagatttcatgtataatagtgttaactagg 600
Query: 61 atgaaatatttcccgaggctacagaagaggtcaccaggggctaagggacaaagacacact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 599 atgaaatatttcccgaggctacagaagaggtcaccaggggctaagggacaaagacacact 540
Query: 121 ctctaattctctaattccatctttaattaagcttcatggttaggccactggtggtggtac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 539 ctctaattctctaattccatctttaattaagcttcatggttaggccactggtggtggtac 480
Query: 181 ttttgccttctcttcccagttcgatttattttctgagggaagaatttgtcttccagtggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ttttgccttctcttcccagttcgatttattttctgagggaagaatttgtcttccagtggg 420
Query: 241 gtgtgacagttgtcttattcctttattctttttagtgatgacattcatttccccaagttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 gtgtgacagttgtcttattcctttattctttttagtgatgacattcatttccccaagttc 360
Query: 301 catcttaggagttaatgtgaaatcaacatgataactgaaaattcacctccgaaaatgcaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 catcttaggagttaatgtgaaatcaacatgataactgaaaattcacctccgaaaatgcaa 300
Query: 361 aactagctggaggtagacaaagacacactggatttataaaaatgctgagttagacaccca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 299 aactagctggaggtagacaaagacacactggatttataaaaatgctgagttagacaccca 240
Query: 421 cttacccagaaaggggactatactttccaaaggtcctggtgcatgtatgcatgtatgtac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 239 cttacccagaaaggggactatactttccaaaggtcctggtgcatgtatgcatgtatgtac 180
Query: 481 gtatatatttagattaaataactaatggatgttcctatgtg 521
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 179 gtatatatttagattaaataactaatggatgttcctatgtg 139
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space: 466944
Effective search space used: 466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
