Query= MSMg01no407_i06.b1 MSMg01no407_i06.b1 CHROMAT_FILE:
MSMg01no407_i06.b1 PHD_FILE: MSMg01no407_i06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:10 2005
(638 letters)
>mm_chr1_168772008_168773043
Length = 1036
Score = 1183 bits (612), Expect = 0.0
Identities = 628/634 (99%), Gaps = 2/634 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaaacttaccaaaaaaaaaaaaaattatacaccagaattaaatagaccccaata 64
|||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaaactaa--aaaaaaaaaaaaaattatacaccagaattaaatagaccccaata 262
Query: 65 gagagctaagtgaacttgtacaaagttagaataggcattcagcatgaaacccaccacaga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 gagagctaagtgaacttgtacaaagttagaataggcattcagcatgaaacccaccacaga 322
Query: 125 gcttcatattagattttatatttttactactgaatatattttgtatttatctattttata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 gcttcatattagattttatatttttactactgaatatattttgtatttatctattttata 382
Query: 185 gagtttatcaaattaaaaccaaagtatttaaaactttaaaaagcaagaaaattacatgta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 gagtttatcaaattaaaaccaaagtatttaaaactttaaaaagcaagaaaattacatgta 442
Query: 245 tatattacacgtgtgctggagtgatgtggatacgggtctagcttagagagaaaaatgtta 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 tatattacacgtgtgctggagtgatgtggatacgggtctagcttagagagaaaaatgtta 502
Query: 305 agaatatcaaggaagagaaagatgaaagctatcttacaagatatcccttttagcagtatg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agaatatcaaggaagagaaagatgaaagctatcttacaagatatcccttttagcagtatg 562
Query: 365 gtggtatgtgccccaggagtttacttcatttcaggtccctaagacatgcaatttgggatt 424
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 563 gtggtatgtgtcccaggagtttacttcatttcaggtccctaagacatgcaatttgggatt 622
Query: 425 catctagctgagaaagaaggccagaatcttttaaattcaggtccccaggatgttcctata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 623 catctagctgagaaagaaggccagaatcttttaaattcaggtccccaggatgttcctata 682
Query: 485 tgcactaagaacttactggtagattaagacaatagggcataagctacctaaacctcaaga 544
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 683 tgcactaagaacttactggtagattaagacaatagggcacaagctacctaaacctcaaga 742
Query: 545 gctttacattcatgtgatatacagcatttcctcacagttgtaactcgcacatactaaaca 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 743 gctttacattcatgtgatatacagcatttcctcacagttgtaactcgcacatactaagca 802
Query: 605 gtttggcatgataccaaacaggctggatgcaaac 638
||||||||||||||||||||||||||||||||||
Sbjct: 803 gtttggcatgataccaaacaggctggatgcaaac 836
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 638
Length of database: 1036
Length adjustment: 10
Effective length of query: 628
Effective length of database: 1026
Effective search space: 644328
Effective search space used: 644328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no407_i06.g1 MSMg01no407_i06.g1 CHROMAT_FILE:
MSMg01no407_i06.g1 PHD_FILE: MSMg01no407_i06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:11 2005
(452 letters)
>mm_chr1_168962757_168963608
Length = 852
Score = 859 bits (444), Expect = 0.0
Identities = 450/452 (99%)
Strand = Plus / Minus
Query: 1 ttttgttttcagagtttaatgctctcagaacaaccccactctggtctatgctgggtagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 ttttgttttcagagtttaatgctctcagaacaaccccactctggtctatgctgggtagag 593
Query: 61 ctgactgactctagtatcttaagagggcagatggaatgccaggagctaccatcctgagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 ctgactgactctagtatcttaagagggcagatggaatgccaggagctaccatcctgagga 533
Query: 121 aaggccgctggatttcaagcctccctcctcataaagttttctttcgcccacggaggagtt 180
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 532 aaggccgctggatttcaagcctccctcctcataaagttttctttcacccacggaggagtt 473
Query: 181 aagtctcggttgttggtctgctctgctcaatagcaagaggcatattgggtgaggatgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 aagtctcggttgttggtctgctctgctcaatagcaagaggcatattgggtgaggatgttc 413
Query: 241 tctttattgaggaaaagacagggcagtcaggtggcattcttaagtcttcttttgcagcca 300
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 tctttattgagggaaagacagggcagtcaggtggcattcttaagtcttcttttgcagcca 353
Query: 301 ggcgagaaaagggatgaaggaggaaccaagccagagtggattcctgatggaacattttcc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 ggcgagaaaagggatgaaggaggaaccaagccagagtggattcctgatggaacattttcc 293
Query: 361 gtcatgggtctggtactgattccctgcctcacccaacacagctgcaggaacagggtgtga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 292 gtcatgggtctggtactgattccctgcctcacccaacacagctgcaggaacagggtgtga 233
Query: 421 aactctatactaccactttgccaaggggagaa 452
||||||||||||||||||||||||||||||||
Sbjct: 232 aactctatactaccactttgccaaggggagaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 452
Length of database: 852
Length adjustment: 10
Effective length of query: 442
Effective length of database: 842
Effective search space: 372164
Effective search space used: 372164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
