AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCCAGAGGATCCGCGGAA
TTCAATGATTATCCATCACAACATGCCCAAATTTATGGGACAGAATAAAA
GTAATGATAAGATCAAGATTCAAAGTAGAAAGTACATCCATAAAGAAATT
AGAAAGTTTTCATACCAGCAATTAAAACGATTCAAAAGTACCCATGAATC
AGGGCTGAAACCCATCAGTTATGAAGACAATGATGCAAAGAAACAATGAA
AACAAGAGTTGGTTATTTGAGAAAATAAGCAAGATAAACAAATGTAAATC
TATATGGAGAGAAACATATAGCAGTCCCACTAAAATTAGGGGCAAGACAA
GGCTGCCAACTCTCTCCCTGTCTATGAAATATAGTACTTGAGGTTCTAGC
CAGAACAATTAGACAGCTGATGGAGATCAAGTGGATATAAACTAGAAAGG
AAGAAACCAATGTATGACTCTTCAGATGATGTGATAGTGTACAGATTGTT
AAGAGAATTGAATGGAAATCTGCAAATGATTGGTGTGTGCAGGGATGGGA
TGTCAGGGCCTTTCCAGAGCCCTTTTATAGGGGAGGTGTACAGTTATCAA
TGGGGGTAACATTCAGCGACTTACAGCATTGTGGGCATGGAACCTTACGA
ACCTCCTGTAGCTAAGTANGAACCTCACAGTCGATAGATAGCGACATTCA
TCTACCACAAATATTCTAACCTAAAATATATCCTGTCCTACCCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTTTAACTTTATTTTTATTGTTTGATG
TTTGAATACAGTGGTAAAGAAAGTATGTGATTTGAGAAAATTAAAGGGTC
TTAATTCTTATAAAACACTTACTTTGTAGAACAAATGTAGCACTTAATTA
ATGCTAGTTGTTGCCCTTTGTAGACTATTCATTTTATGTTTTCTAGTTTA
TAATTCTTTCTTTAAAAATATTTCTTAAATTTATTTTGAGGGTTGGGTGG
ATATGTATCTGCTATGTGAGAGTGTGCCTGTGTGTGTGTTCTGTGTATAA
ATCAGAGACCAACTTTCAAGAGTTGATTCTCTCCTTTCACTATATGAATC
CCAGGGGATGGAACATTGTTCCTCTGGATTGGGACCAAACACTTTTACTT
GCTGAGGGACTCTAACCATTCAGTCTCTGCAGTGATTCTGTCTGCATAAT
CCTTTCCCTCCTTTCACATGCAAAGAGAGCAAGAATTTCCTTCTGTTTAG
ATTTTCTAGACTTCTCTGACTCATTACATATATTTAATCTTAGAGCTTGA
AAGACACTATTATACACAGTTTAAAAGTTTATGTGTTTGTACACTTGAGT
ATGTGGAGGCCAGAGGTCAATATCAGGTGTGTCCCTTGAACAGTGTCCAC
CACCTTTTTTTTTTTTTTTGAGACAGAGACTCAATGAGCCTTGAG

Query= MSMg01no407_k11.g1 MSMg01no407_k11.g1 CHROMAT_FILE:
MSMg01no407_k11.g1 PHD_FILE: MSMg01no407_k11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:23:21 2005
         (555 letters)



>mm_chr1_101466290_101467245
          Length = 956

 Score =  901 bits (466), Expect = 0.0
 Identities = 500/518 (96%), Gaps = 12/518 (2%)
 Strand = Plus / Minus

                                                                       
Query: 50  tatgtgatttgagaaaattaaagggtcttaattcttataaaacacttactttgtagaaca 109
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 956 tatgtgatttgagaaaattaaagggtcttaattcttataaaacacttactttgtagaaca 897

                                                                       
Query: 110 aatgtagcacttaattaatgctagttgttgccctttgtagactattcattttatgttttc 169
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 896 aatgtagcacttaattaatgctagttgttgccctttgtagactattcattttatgttttc 837

                                                                       
Query: 170 tagtttataattctttctttaaaaatatttcttaaatttattttgagggttgggtggata 229
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 836 tagtttataattctttctttaaaaatatttcttaaatttattttgagggttgggtggatt 777

                                                                       
Query: 230 tgtatctgcta-----------tgtgagagtgtgcctgtgtgtgtgttctgtgtataaat 278
           |||||||||||           ||||||||||||||||||| ||||||||||||||||||
Sbjct: 776 tgtatctgctaaggtgtgggtatgtgagagtgtgcctgtgtatgtgttctgtgtataaat 717

                                                                       
Query: 279 cagagaccaactttcaagagttgattctctcctttcactatatgaatcccaggggatgga 338
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 716 cagagaccaactttcaagagttgattctctcctttcactatatgaatcccaggggatgga 657

                                                                       
Query: 339 acattgttcctctggattgggaccaaacacttttacttgctgagggactctaaccattca 398
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 656 acattgttcctctggattgggaccaaacacttttacttgctgagggactctaaccattcc 597

                                                                       
Query: 399 -gtctctgcagtgattctgtctgcataatcctttccctcctttcacatgcaaagagagca 457
            |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 tgtctctccagtgattctgtctgcataatcctttccctcctttcacatgcaaagagagca 537

                                                                       
Query: 458 agaatttccttctgtttagattttctagacttctctgactcattacatatatttaatctt 517
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 536 agaatttccttctgtttagattttctagacttctctgactcattacttatatttaatctt 477

                                                 
Query: 518 agagcttgaaagacactattatacacagtttaaaagtt 555
           ||||||||||||||| ||||||||||||||||||||||
Sbjct: 476 agagcttgaaagacattattatacacagtttaaaagtt 439


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 555
Length of database: 956
Length adjustment: 10
Effective length of query: 545
Effective length of database: 946
Effective search space:   515570
Effective search space used:   515570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)