Query= MSMg01no408_f22.b1 MSMg01no408_f22.b1 CHROMAT_FILE:
MSMg01no408_f22.b1 PHD_FILE: MSMg01no408_f22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:20 2005
(144 letters)
>mm_chr1_64296736_64297280
Length = 545
Score = 205 bits (106), Expect = 9e-58
Identities = 126/136 (92%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 5 gaattctacttacat----tccgtataaatagcccagacaagtacctgatgatgggagtc 60
||||||||||||||| | |||||||||||||||||||||||||||||| ||||||
Sbjct: 337 gaattctacttacataaagt---tataaatagcccagacaagtacctgatgattggagtc 281
Query: 61 agataagtgactggaggctaggcacattgacaggatgtgagggaggaatttttcaggggt 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 agataagcgactggaggctaggcacattgacaggatgtgagggaggaatttttcaggggt 221
Query: 121 gggatggacagtgagg 136
||| ||||||||||||
Sbjct: 220 ggggtggacagtgagg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 4
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 545
Length adjustment: 8
Effective length of query: 136
Effective length of database: 537
Effective search space: 73032
Effective search space used: 73032
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no408_f22.g1 MSMg01no408_f22.g1 CHROMAT_FILE:
MSMg01no408_f22.g1 PHD_FILE: MSMg01no408_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:20 2005
(335 letters)
>mm_chr1_64153600_64154335
Length = 736
Score = 545 bits (282), Expect = e-159
Identities = 316/336 (94%), Gaps = 15/336 (4%)
Strand = Plus / Plus
Query: 1 tgtacatgtttccatatcagggtttctaagaaaatccctgaactggttattctgacacac 60
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 tgtacatgtttctatatcagggtttctaagaaaatccctgaactggttattctgacacac 274
Query: 61 acacacacacacacacacacacacacacacacacaccaaaaagtgttttcccaccatttg 120
|||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 275 acacacacacacacacacacac--------------caaaaagtgttttcccaccatttg 320
Query: 121 ttggtttagtctctgaaagaggctaagggaaccaccagaacaaaatcatttttggttaat 180
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ttggtttagtctctgaaagaggctaagggaatcaccagaacaaaatcatttttggttaat 380
Query: 181 gagtatgcagtgcctgactggggaaaaaaaa-ttttaagtggttgtttttggttttgttt 239
||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||
Sbjct: 381 gagtatgcagtgcctgactggggaaaaaaaaattttaagtggttgtttttgtttttgttt 440
Query: 240 tctttaattctcacttaattttatttaataatttattaattttatttttcaccataaata 299
|||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tctttaattctcacataattttatttaataacttattaattttatttttcaccataaata 500
Query: 300 gtactgaaggggttgaggagttttgagtttttgttt 335
||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtactgaaggggttgaggagttttgagtttttgttt 536
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 9
Number of successful extensions: 9
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 736
Length adjustment: 9
Effective length of query: 326
Effective length of database: 727
Effective search space: 237002
Effective search space used: 237002
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
