TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGCGCGGAATT
CAAGAACGTAACAAAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGGGAGGG
AGGCACTCCTCTTTTTTTGCCCCNTCTTTTCTCCCTCTTCTCTCTCTCCT
CCCNNCCCTTTCCTTTTCTCTTGTCCTTCTTTTCTCCCTTCTTTTTCTTC
TCCCTCCCCCCCCTTCCCCCTTTCCTTCTTCTTTTTCCCCCCTCCCCCCT
CCCCTTTTTTTTTTCCTCCTTTCCCTCCCCCCCCCCCCCTTTCCCTCCTC
TCTTCCCCNCCCTCCCCCCCCGGCCCCCTTTTTCCCTCCCTTTCCCCCCC
CCCCCTCTCTCCCTTCCTTCCCCTTTTTTTTTTTCCCCCCCCTCTTCCCC
CCTCCTTCCTTTCCTCTCCCTTCTTCCCTCCCCCTCTCCCGCCCCCCCCC
CCCCACTTTCCTTTCCTCCTTCTCTCTCCCTCCTCCTCTTCTCCTCTTTC
TTTTCCTCCCCCCCCCCCCCTCTTCTTTCTTCTCTCCCTTCCTTTTTTCC
TCTCCTTTTCCCCNCCCTCCCTTCTCCCTCTCNTCCCCTCTTTCTCTCTC
CTCTCCCTCTTCTCCTTTCCCTTCTCCCTTTCTCTTCCCCCCTTTTCTCC
CCTTTCCTCCTTTTTCTNTTTCTCTCTCTTCTTTTTTNTCTCTCTTCCCT
TTCTTTCTCTCCTCCTCTTCCTCTCTTCCCTTTCTCTCCCCTCCCTCCTC
CTCCTCNCCTTCTCTTTTTTCTTTCTCTCTCCCCTCCTTTCCCCTCCTTC
CCTCCCTCTCCCCTTCTCTCCCTTCCCTCTTTTTCTCTCTCCTCTCCCTT
CTCTCTCTTTTCCCCCTCCTCTTCTTTTTCTTTCCCCCTTCTCCCTCT

GCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXAACTATGTTTTTGACTGTTAATTGTGCACT
TGCACGCGTGTATATGTGTATGATTTAACTCCAAGTTATCTCTCTGATCT
CAACCCTAACCTTTTTAAATGACCAGCTGGGAAGGAAGAAGAGATCAGAG
TTTTGAACTAGAAGGAGCAAGCTTCAAGGACAAGTGTTAAAATGAGAATT
CTTTGAATCAGTTCTTGGGAAATTACGCTAGGAAACAGATAATGGTAGAG
CCTAAGGATGACTTCTGGGCATGAGAAACCAAGAATTTGTGAAGGGAAAA
CAAGAACCAGACATGAGGAGATAAAGACTTGAGCAGCTGGAGTATTGGAT
CGTTTGCCTGCTATCCCAGCACTTGAAAGCATCCAGGATCATGGAAAGAA
CTGAAGTGGGAGAAAACGGACTTGGAAGGCTTCCAGGAAGCAATGGGGAA
ACCAATGAATGACAGTATCAGAAAGGTCACAGTGTTTTTATCATTATTAT
CATTATCATAATTATGACATTTATCAGTATGTGGAGGTTGGGCATATGTT
CCATGGTACACATGGAGAGGCCAAGAAACAACTTGTGAGTTTGGCCTGTT
CTCCCACATATGGGTTTCACGGAACAAATTCCGGCCCCCAGCTTTGGTGG
CAAGGAACTCCACCTATTGGACCCTTTTGCCCACCCATGAACCTTTTTTA
TTTGCTGGN

Query= MSMg01no408_i19.g1 MSMg01no408_i19.g1 CHROMAT_FILE:
MSMg01no408_i19.g1 PHD_FILE: MSMg01no408_i19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:24:34 2005
         (508 letters)



>mm_chr1_87482741_87483648
          Length = 908

 Score =  913 bits (472), Expect = 0.0
 Identities = 499/508 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aactatgtttttgactgttaattgtgcacttgcacgcgtgtatatgtgtatgatttaact 60
           ||||||||||||| |||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 201 aactatgtttttgtctgttaattgtgcacttgcacgtgtgtatatgtgtatgatttaact 260

                                                                       
Query: 61  ccaagttatctctctgatctcaaccctaacctttttaaatgaccagctgggaaggaagaa 120
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccgagttatctctctgatctcaaccctaacctttttaaatgaccagctgggaaggaagaa 320

                                                                       
Query: 121 gagatcagagttttgaactagaaggagcaagcttcaaggacaagtgttaaaatgagaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gagatcagagttttgaactagaaggagcaagcttcaaggacaagtgttaaaatgagaatt 380

                                                                       
Query: 181 ctttgaatcagttcttgggaaattacgctaggaaacagataatggtagagcctaaggatg 240
           ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||
Sbjct: 381 ctttgaatcagttcttgggaaattaagctagggaacagataatggtagagcctaaggatg 440

                                                                       
Query: 241 acttctgggcatgagaaaccaagaatttgtgaagggaaaacaagaaccagacatgaggag 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acttctgggcatgagaaaccaagaatttgtgaagggaaaacaagaaccagacatgaggag 500

                                                                       
Query: 301 ataaagacttgagcagctggagtattggatcgtttgcctgctatcccagcacttgaaagc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataaagacttgagcagctggagtattggatcgtttgcctgctatcccagcacttgaaagc 560

                                                                       
Query: 361 atccaggatcatggaaagaactgaagtgggagaaaacggacttggaaggcttccaggaag 420
           |||||||| |||||||||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 561 atccaggaccatggaaagaaccgaggtgggagaaaacggacttggaaggcttccaggaag 620

                                                                       
Query: 421 caatggggaaaccaatgaatgacagtatcagaaaggtcacagtgtttttatcattattat 480
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caatggggaaaccaatggatgacagtatcagaaaggtcacagtgtttttatcattattat 680

                                       
Query: 481 cattatcataattatgacatttatcagt 508
           ||||||||||||||||||||||||||||
Sbjct: 681 cattatcataattatgacatttatcagt 708


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)