XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTC
AACTGAGTACCACCAAATGGTTGAGAAGCACCTAAAAAGTGTTCAACATC
CTTAATCATCAAGGAAATGCAAATCAAAACAACCCTGAGATTTCACCCCA
CACCAATCAGAATGGCTAAAATAAAAAATTCAGGTGACAGCAGATGCTGG
CAAGGATGTGGAAAAAGAGAAACATTCCTCCATTGCTGTTGGGATTGCAA
GCATGTACAAACACTCTGGAAATCAGTATGGGGGTTCCTGGGAAAACTGG
ACATAGTATTACCGGAAGATTCAGCAATTCCTCTCCTGGTCATATACCCA
GAAGATGTTCCAAGGTGTAATAAAGACACATGCTCTACTATGTTCATAGC
AGTCTTATTTATAACAGCCAGAAGCTGGAAAGAAACCAGATGTCCTTCAA
TAGAAGAATGGATACCGAAAATGTGTGACATTTACACAATTGAGCACTAT
TCCGCTATTAAAAACCATGAATTTATGACATTCTTGGCAAATGAACGCAT
TCAAATGATATTATCTTGTGTTAGGTCACCCACTTCTCAACATTTCCCTC
TCTTTTTTCCCCCCCCTTATCTGATATATATCTCCCTCCCTTACCATATC
CCCCATCAATTTTTTTCCTATTTTTTCTCCTTTTAACCTTAACAACCCCG
TTTTTTTACCCCCTTTAACCCCTCTTTCCTTTCTCTCTCTTCCCCCCCTT
TTATCCCCTTTTTTCACTTCTTTTCTTCTCTTTCN

GTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXCTTTAAACTCCTTTCAAGGTATTTTGTCACAGT
GATGAATAAGGAAACTCACATGGAAGATGCACTTTGTCAGCATAAATTGA
CATTTCCAAGACAATAAAATAATAAAAGTCTAGAGTAATGAGAAGTGTAT
TTCTTTTCCCCGAGCCAGAATTGTGGTTGGTTGGTTTACTTGCTTGTTTT
GGTTCATTCAATAATTAGTTTGTGCTTCAGGCAACTACTTGGTGGAAAGG
TGTTAAAAAAGGCTAGAAGACAGAAGAAATTTGGAGATGTGATTGTGAGA
ACACCATGAGATCTGACTCACAGGTAGTAAGGTAGGCCTATCGATCTCGG
CCATAGAAGAATGAGAGAAAACACACAAGGTCTTAGGTTCAAGTAAGAGG
GGGTAGCCTAATGAGAATTTGTGAAGCCTCTCCTAAAGGATATATAATTC
ACAGATTAACTGAGTAGAGTCATTCTCTGGTAGAAAGGAAAAGGAGATCA
TTTGGTGTGACAAATTTGGAGGATGATGGATGAATGGATTATAGTTGCCT
GATAAAAAGGTGACTGCTAAAGTGATTAAAATCCTTAATTATGATCAANC
GGGAGGTGACTAAACTTTTTGCTGACTTTATCAAAATCCGACCTGTTTCC
GCTGTTACACTTTTTTTCAGCCCCCTTAATTTTTTCTGAAAAGTTTACCC
CCATGGTTTCTTCAATAATTTTTTTCTGGGCGACG

Query= MSMg01no408_p19.g1 MSMg01no408_p19.g1 CHROMAT_FILE:
MSMg01no408_p19.g1 PHD_FILE: MSMg01no408_p19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:10 2005
         (487 letters)



>mm_chr1_105261228_105262114
          Length = 887

 Score =  903 bits (467), Expect = 0.0
 Identities = 482/487 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   ctttaaactcctttcaaggtattttgtcacagtgatgaataaggaaactcacatggaaga 60
           |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 ctttaaactcttttcaaggtattttgtcacagtgatgaataaggaaactcacatggaaga 628

                                                                       
Query: 61  tgcactttgtcagcataaattgacatttccaagacaataaaataataaaagtctagagta 120
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 627 tgcactttgtcagcataaattgacatttccaatacaataaaataataaaagtctagagta 568

                                                                       
Query: 121 atgagaagtgtatttcttttccccgagccagaattgtggttggttggtttacttgcttgt 180
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 atgagaagtgtatttctttcccccgagccagaattgtggttggttggtttacttgcttgt 508

                                                                       
Query: 181 tttggttcattcaataattagtttgtgcttcaggcaactacttggtggaaaggtgttaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 tttggttcattcaataattagtttgtgcttcaggcaactacttggtggaaaggtgttaaa 448

                                                                       
Query: 241 aaaggctagaagacagaagaaatttggagatgtgattgtgagaacaccatgagatctgac 300
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 aaaggctagaagacagaaggaatttggagatgtgattgtgagaacaccatgagatctgac 388

                                                                       
Query: 301 tcacaggtagtaaggtaggcctatcgatctcggccatagaagaatgagagaaaacacaca 360
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 387 tcacaggtagtaaggtaggcctatcgatctcggccatggaagaatgagagaaaacacaca 328

                                                                       
Query: 361 aggtcttaggttcaagtaagagggggtagcctaatgagaatttgtgaagcctctcctaaa 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 aggtcttaggttcaagtaagagggggtagcctaatgagaatttgtgaagcctctcctaaa 268

                                                                       
Query: 421 ggatatataattcacagattaactgagtagagtcattctctggtagaaaggaaaaggaga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 ggatatataattcacagattaactgagtagagtcattctctggtagaaaggaaaaggaga 208

                  
Query: 481 tcatttg 487
           |||||||
Sbjct: 207 tcatttg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space:   418329
Effective search space used:   418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)