Query= MSMg01no409_g10.b1 MSMg01no409_g10.b1 CHROMAT_FILE:
MSMg01no409_g10.b1 PHD_FILE: MSMg01no409_g10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:45 2005
(254 letters)
>mm_chr1_21887970_21888623
Length = 654
Score = 433 bits (224), Expect = e-126
Identities = 242/254 (95%), Gaps = 10/254 (3%)
Strand = Plus / Minus
Query: 1 agaatatattgtatgagaaatttcttttcagttaaataaaacttgaagaaagaaagaatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 419 agaatatattgtatgagaaatttcttttcagttaaataaaacttgaagaaagaaagaatg 360
Query: 61 aaattgaatttagagatataaatatatggagtagaaacttatgaatgataatcagtccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 359 aaattgaatttagagatataaatatatggagtagaaacttatgaatgataatcagtccat 300
Query: 121 aggaatagatgacatgagtccagtgaaatctaatgcaagcacatcaagtaagagaagagc 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 299 aggaatagatgacatgagtccagtgaaatctaatgcaagcacatcaagtaagggaagagc 240
Query: 181 aacagggtcctcagaagcttgtgtatgagatggggaagcagcaatgtgcctgatcatgac 240
||||||||||||||||||||||||||||||||||||| |||||| ||||||
Sbjct: 239 aacagggtcctcagaagcttgtgtatgagatggggaa----------gcctgaccatgac 190
Query: 241 attggagagacaga 254
||||||||||||||
Sbjct: 189 attggagagacaga 176
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 654
Length adjustment: 9
Effective length of query: 245
Effective length of database: 645
Effective search space: 158025
Effective search space used: 158025
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no409_g10.g1 MSMg01no409_g10.g1 CHROMAT_FILE:
MSMg01no409_g10.g1 PHD_FILE: MSMg01no409_g10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:25:45 2005
(412 letters)
>mm_chr1_21735405_21736216
Length = 812
Score = 613 bits (317), Expect = e-180
Identities = 334/341 (97%), Gaps = 5/341 (1%)
Strand = Plus / Plus
Query: 1 aataggactttagaaattatccccttaaattatttatgagatagcttctaagcagtcaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aataggactttagaaattatccccttaaattatttatgagatagcttctaagcagtcaat 260
Query: 61 cactttggggttttgaatatcttttgcgtgatttttttcctgagtacaaagagtgtctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cactttggggttttgaatatcttttgcgtgatttttttcctgagtacaaagagtgtctgc 320
Query: 121 taggcaaaaagtaaggttctttattactttttctgtaatgtagaaagtatcacaaagatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taggcaaaaagtaaggttctttattactttttctgtaatgtagaaagtatcacaaagatt 380
Query: 181 tgagtcccccaccccccattcaaaaggactgaaagggtttaggagccttagtctatactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgagtcccccaccccccattcaaaaggactgaaagggtttaggagccttagtctatactt 440
Query: 241 tagcaaaatatattttgtttttcatatccttatcttccagtgggccatgaatatatatat 300
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagcaaaatataatttgattttcatatccttatcttccagtgggccatgaatatatatat 500
Query: 301 atatatattactaatatatatataca-taacacctattgat 340
|| | ||||||||||||||||||| ||||||||||||||
Sbjct: 501 at-t---ttactaatatatatatacagtaacacctattgat 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 812
Length adjustment: 9
Effective length of query: 403
Effective length of database: 803
Effective search space: 323609
Effective search space used: 323609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
