Query= MSMg01no410_e16.b1 MSMg01no410_e16.b1 CHROMAT_FILE:
MSMg01no410_e16.b1 PHD_FILE: MSMg01no410_e16.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(210 letters)
>mm_chr1_69948079_69948688
Length = 610
Score = 348 bits (180), Expect = e-100
Identities = 205/218 (94%), Gaps = 8/218 (3%)
Strand = Plus / Plus
Query: 1 aacattcatctctttttacctatgcatctttgtagatgatgtcactgtagggctgggagg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacattcatctctttttacctatgcatctttgtagatgatgtcactgtagggctgggagg 260
Query: 61 aaatctcatggagtctagtgttgaaaagagcaatgagtaagtttaacaaatacttctgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaatctcatggagtctagtgttgaaaagagcaatgagtaagtttaacaaatacttctgtt 320
Query: 121 tctgaggattattgtttttcatgattgtgagacaaacatttgaggctattcatgggtttt 180
|||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgaggaccattggttttcatgattgtgagacaaacatttgaggctattcatgggtttt 380
Query: 181 tttgtt--------gttgctggtttttttgttttgttt 210
||| || |||| |||||||||||||||||||
Sbjct: 381 ttttttttttttttgttgttggtttttttgttttgttt 418
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 210
Length of database: 610
Length adjustment: 9
Effective length of query: 201
Effective length of database: 601
Effective search space: 120801
Effective search space used: 120801
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_e16.g1 MSMg01no410_e16.g1 CHROMAT_FILE:
MSMg01no410_e16.g1 PHD_FILE: MSMg01no410_e16.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:26:59 2005
(368 letters)
>mm_chr1_70154516_70155283
Length = 768
Score = 650 bits (336), Expect = 0.0
Identities = 360/368 (97%)
Strand = Plus / Minus
Query: 1 gcttggttatttattctttaaataaatatcttacaaccacatacattcttaaattatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 568 gcttggttatttattctttaaataaatatcttacaaccacatacattcttaaattatttt 509
Query: 61 cattgactttcatgatattctcattcacactccattgacatattgtatgttaaatataaa 120
||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
Sbjct: 508 cattgactttcatgatattctcattcatactccattgacatattgtatgttaaatataga 449
Query: 121 ggtgcattatatttaaaaagggattgctgatatttgagcttcttctatctttacactgaa 180
||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||
Sbjct: 448 ggtgcattatatttaaaaaggaattgctgatatttgagcttcttctagctttacactgaa 389
Query: 181 acctataatttgctgacattagcaaactatatgttttcatggccacgggaattgcagata 240
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 388 acctataatttgctgacattagcaaactatatgttttcatggccatgggaattgcagata 329
Query: 241 ccattagcaattttcttgagtcatatttgatgggtttttgaaacatgctgtttatatgtg 300
| || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 328 ctatgagcaattttcttgagtcgtatttgatgggtttttgaaacatgctgtttatatgtg 269
Query: 301 ctctttatactagcaaaactcagtttcagttacctgctcagtattttaaggttaaggata 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctctttatactagcaaaactcagtttcagttacctgctcagtattttaaggttaaggata 209
Query: 361 gcaacatc 368
||||||||
Sbjct: 208 gcaacatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 368
Length of database: 768
Length adjustment: 9
Effective length of query: 359
Effective length of database: 759
Effective search space: 272481
Effective search space used: 272481
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
