Query= MSMg01no410_f06.b1 MSMg01no410_f06.b1 CHROMAT_FILE:
MSMg01no410_f06.b1 PHD_FILE: MSMg01no410_f06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:02 2005
(378 letters)
>mm_chr1_75535129_75535906
Length = 778
Score = 644 bits (333), Expect = 0.0
Identities = 364/381 (95%), Gaps = 12/381 (3%)
Strand = Plus / Plus
Query: 4 ggaattcagtcactttctcacatgtgccagcatgctgtattttggttctgtgtgccggca 63
||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcagtcacatggtcacatgtgccagcatgctgtattttggttctgtgtgccggca 263
Query: 64 tgccatattttgcatccacccacaagggtcagtgtggtgtggctgtaacacgggaaggac 123
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 264 tgccatattttgcatccacccacaagggtcagtgtggtgtggttgtaacacgggaaggac 323
Query: 124 acgggatttaggactgtgtcttagttgtatgattcacggcttagctgtgagctagtaacg 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acgggatttaggactgtgtcttagttgtatgattcacggcttagctgtgagctagtaacg 383
Query: 184 tccccttgtttgctcacctgcagtgtggaattgagactaatcaataacttatctgcttca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tccccttgtttgctcacctgcagtgtggaattgagactaatcaataacttatctgcttca 443
Query: 244 cagaggtgttgagtatccgtgggagtattgtgttttttc------tcaatgcattcaata 297
|||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 444 cagaggtgttgagtatccgtgggagtattgtg------caaaacctcaatgcattcaata 497
Query: 298 aatgctggctacagaatccgtctgttagttgctacatgcttctttgtcacccaggagcct 357
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 498 aatgctggctacagaatccgcctgttagttgctacatgcttctttgtcacccaggagcct 557
Query: 358 cggactgttctttgtaactgg 378
|||||||||||||||||||||
Sbjct: 558 cggactgttctttgtaactgg 578
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 378
Length of database: 778
Length adjustment: 9
Effective length of query: 369
Effective length of database: 769
Effective search space: 283761
Effective search space used: 283761
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_f06.g1 MSMg01no410_f06.g1 CHROMAT_FILE:
MSMg01no410_f06.g1 PHD_FILE: MSMg01no410_f06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:02 2005
(421 letters)
>mm_chr1_75693844_75694663
Length = 820
Score = 706 bits (365), Expect = 0.0
Identities = 407/421 (96%), Gaps = 2/421 (0%)
Strand = Plus / Minus
Query: 1 agaagagttgaagagttggcatagtggtgcacacctttaatctttaatctcagcattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 758 agaagagttgaagagttggcatagtggtgcacacctttaatctttaatctcagcattcag 699
Query: 61 aagacttctgcctggtctacacagcaacttgcagtacagccagggatacaaaatgagacc 120
||||| |||||||||||||||||||||||||||||| ||||||||||||| | |||||||
Sbjct: 698 aagacctctgcctggtctacacagcaacttgcagtatagccagggatacatagtgagacc 639
Query: 121 ttgtctcaaaaacagaaaaaaaaaagaaagaaagaaaaaggaaaaagaaagatggtatga 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 ttgtctcaaaaacag-aaaaaaaaagaaagaaagaaaaaggaaaaagaaagatggtatga 580
Query: 181 tctcttagcagtcaaattgagtcatccacagcagacttacaagtcgtatcctaatactct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 tctcttagcagtcaaattgagtcatccacagcagacttacaagtcgtatcctaatactct 520
Query: 241 ctcgatcattgaaccagccctaccaccgcagcagccctcttagcccccctgggagaatga 300
|| ||||| ||||||||||||||||| |||||||||||||| ||||| |||||||||||
Sbjct: 519 cttgatcagggaaccagccctaccaccacagcagccctcttaaccccc-tgggagaatga 461
Query: 301 acagcaggagagtgaaagactgaagttgttccaagtatggtattaccagtgcccactctc 360
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 460 acagcaagagagtgaaagactgaagttgttccaagtatggtattaccagtgcccactttc 401
Query: 361 ctgtgttcaaaacccaaaacacattcctagaaaactctctctatatataatctttcttta 420
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 ccgtgttcaaaacccaaaacacattcctagaaaactctctctatatataatctttcttta 341
Query: 421 t 421
|
Sbjct: 340 t 340
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 820
Length adjustment: 9
Effective length of query: 412
Effective length of database: 811
Effective search space: 334132
Effective search space used: 334132
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
