Query= MSMg01no410_g11.b1 MSMg01no410_g11.b1 CHROMAT_FILE:
MSMg01no410_g11.b1 PHD_FILE: MSMg01no410_g11.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:08 2005
(191 letters)
>mm_chr1_192779180_192779770
Length = 591
Score = 331 bits (171), Expect = 2e-95
Identities = 186/191 (97%)
Strand = Plus / Minus
Query: 1 gggaacccactgacccctctacccacctggtgcatgggagagcctgggagtgaggagaaa 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 gggaacccactgacctctctacccacctggtgcatgggagagcctgggagtgaggagaaa 332
Query: 61 ggatggggacaggtagtgtcccctaagccaggaagggtggtcttcaagaagagggggggt 120
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 331 ggatggggacaggtagtgtcccctaaggcaggaagggtggtcttcaagaagagggggggt 272
Query: 121 tcactttgtctttctcctgcttttatgccccatggttcttttcacccccatgatgggagc 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 tcactttgtcaccctcctgcttttatgccccatggttcttttcacccccatgatgggagc 212
Query: 181 tctaggcgggg 191
|||||||||||
Sbjct: 211 tctaggcgggg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 191
Length of database: 591
Length adjustment: 8
Effective length of query: 183
Effective length of database: 583
Effective search space: 106689
Effective search space used: 106689
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no410_g11.g1 MSMg01no410_g11.g1 CHROMAT_FILE:
MSMg01no410_g11.g1 PHD_FILE: MSMg01no410_g11.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:08 2005
(408 letters)
>mm_chr1_192623708_192624515
Length = 808
Score = 702 bits (363), Expect = 0.0
Identities = 396/411 (96%), Gaps = 8/411 (1%)
Strand = Plus / Plus
Query: 2 tagggctgttttttgacctactgagggattcagatgttggaggagaagaaaccgcctcta 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 tagggctgttttttgacctactgagggattcagatgttggaggagaagaaaccgcctcta 261
Query: 62 gatcctcacctccagagaagaccctgaggtgggtgctagggctcacactgccagtggcga 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 gatcctcacctccagagaagaccctgaggtgggtgctagggctcacactgccagtggcga 321
Query: 122 gggatgctggggaactaaccgcctgggtgtcagccttgtccccttcaggctgcataacag 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gggatgctggggaactaaccgcctgggtgtcagccttgtccccttcaggctgcataacag 381
Query: 182 actcctcgttcagagatgccaggtccatcttttcttgcccatactcgttgcacagcgtca 241
|||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 actcctcgctcagagacaccaggtccatcttttcttgcccatactcgttgcacagcgtca 441
Query: 242 ggttttt----cgctgtgcactcgtcctctgaactggagcccgaatccagccacttggga 297
||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 442 ggt----agcccgctgtgcactcatcctctgaactggagcccgaatccagccacttggga 497
Query: 298 gagctgggctggccgtcgtcttcctggttgctgtcatcttgagaactcggggtgagactg 357
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 498 gagctgggctggccgtcgtcttcctggttgctgtcgtcttgagaactcggggtgagactg 557
Query: 358 gtcttcagaggcagagccttcagcatgctccctgtgtcactccctctggac 408
|||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 558 gtcttcagaggcagagccttcagcatgctccccgtgtcgctccctctggac 608
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
