Query= MSMg01no410_o23.b1 MSMg01no410_o23.b1 CHROMAT_FILE:
MSMg01no410_o23.b1 PHD_FILE: MSMg01no410_o23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:49 2005
(492 letters)
>mm_chr1_70717973_70718862
Length = 890
Score = 835 bits (432), Expect = 0.0
Identities = 457/466 (98%), Gaps = 3/466 (0%)
Strand = Plus / Minus
Query: 1 ctgtaaaaaggaaataatgagaaaacacgggggtgtaaggactgaggaaaggtgagagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 ctgtaaaaaggaaataatgagaaaacacgggggtgtaaggactgaggaaaggtgagagat 406
Query: 61 gaccaggattctcctggagaaaaggatgaagaaataagataccaagtaaattcacacttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 gaccaggattctcctggagaaaaggatgaagaaataagataccaagtaaattcacacttt 346
Query: 121 ttctgtaaatacctgtttatccaatgaacagatacaaatactcatttgtgttcttggggc 180
||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 345 ttctgtaaatacctgtttatccaatgaacagat--agatactcatttgtgttcttggggc 288
Query: 181 tgtttgtttataactctagagagagttacattagcaccatcttctactttcttaattatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 tgtttgtttataactctagagagagttacattagcaccatcttctactttcttaattatc 228
Query: 241 tatcaagacccctgttttgtggattggccataaggctgacattggctccttaacagcctt 300
|||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 227 tatcaagacccctgaaatgtggattggccataaggctgtcattggctccttaacagcctt 168
Query: 301 atttataatagccagaagctggaaagaacccagatgcccctcaacagaggaatggata-a 359
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 167 atttataatagccagaagctggaaagaacccagatgcccctcaacagaggaatggataca 108
Query: 360 aaaaatgtacatttatacaatggagtactactcagctattaaaaagaatgaatttatgaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 107 aaaaatgtacatttatacaatggagtactactcagctattaaaaagaatgaatttatgaa 48
Query: 420 attcctaggcaaatgaatggacctgaaggccatcatcctgagtgag 465
||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 47 attcctaggcaaatgaatggacctgaagggcatcatcctgagtgag 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 492
Length of database: 890
Length adjustment: 10
Effective length of query: 482
Effective length of database: 880
Effective search space: 424160
Effective search space used: 424160
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no410_o23.g1 MSMg01no410_o23.g1 CHROMAT_FILE:
MSMg01no410_o23.g1 PHD_FILE: MSMg01no410_o23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:27:49 2005
(418 letters)
>mm_chr1_70566342_70567160
Length = 819
Score = 748 bits (387), Expect = 0.0
Identities = 411/421 (97%), Gaps = 5/421 (1%)
Strand = Plus / Plus
Query: 1 atgcacctagaatttaactattgttttattatgattatcattattgttattgttagtact 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 200 atgcacctagaatttaactattgttttattattattatcattattgttattgttagtact 259
Query: 61 gttattgacagggtctcattatgtacctctggttggcctggaactcactatgtagagcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 gttattgacagggtctcattatgtacctctggttggcctggaactcactatgtagagcag 319
Query: 121 gctatcctcagaaatgctgggattaaaagtgtgcac-accctacctagccttttaatatt 179
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 320 gctatcctcagaaatgctgggattaaaagtgtgcaccaccctacctagccttttaatatt 379
Query: 180 gttttcagatataataggcacttggtgttagactagttaagtaacacgattagccattat 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 gttttcagatataaaaggcacttggtgttagactagttaagtaacacgattagccattat 439
Query: 240 taaggaaatgtctatcaattttatatatactcctagagataaatatcatgggttttgggc 299
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 440 taaggaaatgtctatcaattttatatacactcctagagataaatatcatgggttttgggc 499
Query: 300 aatcaaggtgatttcatagggaaagccccc----ccccctttttttcctggttttaaggt 355
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 500 aatcaaggtgatttcatagggaaagccccctcccccccctttttttcctggttttaaggt 559
Query: 356 ctttatagtagaaaggcagaaagagggaaaagagtagagaagtaaaggcaggctatggcc 415
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 560 atttatagtagaaaggcagagagagggaaaagagtagagaagtaaaggcaggctatggcc 619
Query: 416 a 416
|
Sbjct: 620 a 620
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 819
Length adjustment: 9
Effective length of query: 409
Effective length of database: 810
Effective search space: 331290
Effective search space used: 331290
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
