Query= MSMg01no411_i08.b1 MSMg01no411_i08.b1 CHROMAT_FILE:
MSMg01no411_i08.b1 PHD_FILE: MSMg01no411_i08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:36 2005
(543 letters)
>mm_chr1_83324442_83325384
Length = 943
Score = 938 bits (485), Expect = 0.0
Identities = 523/537 (97%), Gaps = 4/537 (0%)
Strand = Plus / Plus
Query: 5 gaattctgaagttgaactccatattttagaaccc--a--tcttttttgtttttcatttgt 60
|||||||||||||||||||| ||||||||||||| | |||||||||||||||||||||
Sbjct: 201 gaattctgaagttgaactccgtattttagaacccctaactcttttttgtttttcatttgt 260
Query: 61 tttttgctttttcttcctgcaaaatttgcagttctctgcatagttgttgtttatgagatg 120
|||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||
Sbjct: 261 tttttgctttttcttcctgcaaaatttgcaattctctgcatagttgttgtttacaagatg 320
Query: 121 ctatttcttgggcacactatgtgctttattcatgaaaggacacagttccaggtctattag 180
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 321 ctatttcttgggcacactatgtgctttactcatgaaaggacacagttccaggtctattag 380
Query: 181 gggagtgtgaggatctctgagaaccagatccctagtaatgtaagaaaagttagcaaacat 240
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gggagtgtgcggatctctgagaaccagatccctagtaatgtaagaaaagttagcaaacat 440
Query: 241 tgtgaaaacaccattttaatccttaaagaatgatctaaaggtcacagagagtacaggtaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtgaaaacaccattttaatccttaaagaatgatctaaaggtcacagagagtacaggtaa 500
Query: 301 acttttattcaagagactccactaaaactagcctaaaactgactgtacccttgtagccca 360
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acgtttattcaagagactccactaaaactagcctaaaactgactgtacccttgtagccca 560
Query: 361 gattctgtggtctcttattcacgctgggggtagtgcacatgggcatctgtgtttaggaaa 420
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 561 gattctgtggtctcttattcacactgggggtagtgcacatgggcatctgtgtttaggaaa 620
Query: 421 gggtgcttcatttattctagggctcccagtgagagttccggggtatcactgggagtcaga 480
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 621 gggtgcttcatttattctagggctcccagtgagagttcctgggtatcactgggagtcaga 680
Query: 481 gatcaccagagttcttcataccctaaagtattaaataaaagatgatacagttattat 537
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gatcaccagagttctccataccctaaagtattaaataaaagatgatacagttattat 737
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 543
Length of database: 943
Length adjustment: 10
Effective length of query: 533
Effective length of database: 933
Effective search space: 497289
Effective search space used: 497289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_i08.g1 MSMg01no411_i08.g1 CHROMAT_FILE:
MSMg01no411_i08.g1 PHD_FILE: MSMg01no411_i08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:36 2005
(332 letters)
>mm_chr7_151917593_151918324
Length = 732
Score = 623 bits (322), Expect = 0.0
Identities = 328/330 (99%)
Strand = Plus / Minus
Query: 1 agcttgggccccagaactggggtcgctggctttggaggaaaagaaagttttctgtgacta 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 530 agcttgggccccagaactggggtcgctggctttggaggaaaagaaagttatctgtgacta 471
Query: 61 tctggctgctgcagggagccacacccagaaggcagggctcaccatagtctcctatctttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 470 tctggctgctgcagggagccacacccagaaggcagggctcaccatagtctcctatctttc 411
Query: 121 cccagcccagcacccagcattgttcaccattccgcctccatcaggccttggcctttggtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 410 cccagcccagcacccagcattgttcaccattccgcctccatcaggccttggcctttggtg 351
Query: 181 ccaggcacacgtgacatttttcatgctgtgtaatgaattgctaaatgcctttccaacctt 240
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 350 ccaggcacacgtgacagttttcatgctgtgtaatgaattgctaaatgcctttccaacctt 291
Query: 241 cagtgatccatttgatggtgatcacgtggctattaggcagacaaattactagttttgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 290 cagtgatccatttgatggtgatcacgtggctattaggcagacaaattactagttttgtgt 231
Query: 301 gtttgtcagtgggtgggctggggtgggtgg 330
||||||||||||||||||||||||||||||
Sbjct: 230 gtttgtcagtgggtgggctggggtgggtgg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
