Query= MSMg01no411_j20.b1 MSMg01no411_j20.b1 CHROMAT_FILE:
MSMg01no411_j20.b1 PHD_FILE: MSMg01no411_j20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:43 2005
(426 letters)
>mm_chr1_138458718_138459543
Length = 826
Score = 719 bits (372), Expect = 0.0
Identities = 403/430 (93%), Gaps = 26/430 (6%)
Strand = Plus / Minus
Query: 20 agttatacgatctcagccccatcattaatgtaatgtgaccatgcttgcttttgtgtgaca 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 agttatacgatctcagccccatcattaatgtaatgtgaccatgcttgcttttgtgtgaca 371
Query: 80 caaggcattaggagacactgcggacatgctggataatggcaagataaataaatagtaggc 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 caaggcattaggagacactgcggacatgctggataatggcaagataaataaatagtaggc 311
Query: 140 gcggaagaccaaagctcctctgtggctctcagaaatatgcactctgtgtttaaaaaacaa 199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gcggaagaccaaagctcctctgtggctctcagaaatatgcactctgtgtttaaaaaacaa 251
Query: 200 agagaaatgcttccatgccgtgtttaaaagt--------------------------aga 233
||||||||||||||||||||||||||||||| |||
Sbjct: 250 agagaaatgcttccatgccgtgtttaaaagtagagagagagagagagagagagagagaga 191
Query: 234 gagagagagagagagagagaaaagaagtatatttaaaaattatctttcttccacgcaacc 293
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 190 gagagagagagagagagagaaaagaagtatatttaaaaattagctttcttccacgcaacc 131
Query: 294 tatatttctgaagtcttgttttcgggagggagtgtggggttgtgggtctcccagtgccac 353
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tatatttctgaagtcttgttttcgggagggagtgtggggttgtgggtctcccagtgccac 71
Query: 354 tgaggaaacagaaacaagctgctagctctttgtagaacagcctcgagataatggggaggt 413
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 70 tgaggaaacagaaacaagctgctagctctttgtagaacagcctcgagataatggggaggt 11
Query: 414 ctgagagacg 423
||||||||||
Sbjct: 10 ctgagagacg 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 426
Length of database: 826
Length adjustment: 9
Effective length of query: 417
Effective length of database: 817
Effective search space: 340689
Effective search space used: 340689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no411_j20.g1 MSMg01no411_j20.g1 CHROMAT_FILE:
MSMg01no411_j20.g1 PHD_FILE: MSMg01no411_j20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:28:43 2005
(240 letters)
>mm_chr1_138289286_138289925
Length = 640
Score = 433 bits (224), Expect = e-126
Identities = 236/240 (98%)
Strand = Plus / Plus
Query: 1 tttttttttttttctgccagtcttcaaagagagagaaagtccttgtttctaggacattct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttttttttttctgccagtcttcaaagagagagaaagtccttgtttctaggacattct 260
Query: 61 ggcgccaccacccctgagggaacaggtgccaaagaactccacttcttacacaatgttgag 120
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggtgccaccacccctgagggaacaggtgccaaagaactccacttcttacacaatgttgag 320
Query: 121 ctgtggggattgtgggacacaagagctgctgtgccgttgtgggggtggggggaagagttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ctgtggggattgtgggacacaagagctgctgtgccgttgtgggggtggggggaagagctc 380
Query: 181 ttccaaacagaaaacaccaactacagataatttttattactttgatattttgatattgtt 240
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||
Sbjct: 381 ttccaaacagaaaacaccaactacagatcatttttattactttgatattttgatactgtt 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
