Query= MSMg01no412_e05.b1 MSMg01no412_e05.b1 CHROMAT_FILE:
MSMg01no412_e05.b1 PHD_FILE: MSMg01no412_e05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:34 2005
(375 letters)
>mm_chr1_124146564_124147338
Length = 775
Score = 694 bits (359), Expect = 0.0
Identities = 371/375 (98%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 1 tgtagagggatattttcccatccacagttgacactacagacacaatttcatgagtcacta 60
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tgtagagggatattttgccatccacagttgacactacagacacaatttcatgagtcacta 680
Query: 61 gctgatagcctcccaggataaaggtgacacattctctcatccacattgtggcttttgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 gctgatagcctcccaggataaaggtgacacattctctcatccacattgtggcttttgtca 620
Query: 121 gcataccctatgagctgattttttttatactttttttttttttaactgagcaaggtcaga 180
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 619 gcataccctatgagctgattttttttatac-ttttttttttttaactgagcaaggtcaga 561
Query: 181 aagttctcttactactcacagcacacctttatttcctctgcctagccactcccttctttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 aagttctcttactactcacagcacacctttatttcctctgcctagccactcccttctttc 501
Query: 241 gaatccttgagccctgagctttcctccagctgctccaacttccctgggttctgatgcacc 300
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 gaatccttgagcccagagctttcctccagctgctccaacttccctgggttctgatgcacc 441
Query: 301 tctagtttccgacagcacccctctcgttccacactggagcaacagggttgctcctcagat 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 440 tctagtttccgacagcacccctctcgttctacactggagcaacagggttgctcctcagat 381
Query: 361 tatgacttctttggg 375
|||||||||||||||
Sbjct: 380 tatgacttctttggg 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 375
Length of database: 775
Length adjustment: 9
Effective length of query: 366
Effective length of database: 766
Effective search space: 280356
Effective search space used: 280356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no412_e05.g1 MSMg01no412_e05.g1 CHROMAT_FILE:
MSMg01no412_e05.g1 PHD_FILE: MSMg01no412_e05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:29:34 2005
(430 letters)
>mm_chr1_123973444_123974273
Length = 830
Score = 816 bits (422), Expect = 0.0
Identities = 428/430 (99%)
Strand = Plus / Plus
Query: 1 ttttttggcacaaaggaagcctgtgactcaacactcaaaagatcagtttacttgaaaatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttttttggcacaaaggaagcctgtgactcaacactcaaaagatcagtttacttgaaaatc 260
Query: 61 ggactgtgttttctattttcaaattcacttcactttgatactaaacgaaacctgtttggt 120
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ggactgtgtgttctattttcaaattcacttcactttgatactaaacgaaacctgtttggt 320
Query: 121 gtagaaaattaaagtagctgcattttatttcagcacaaagaaaccttttattttatttgc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtagaaaattaaagtagctgcattttatttcagcacaaagaaaccttttattttatttgc 380
Query: 181 ctctacctctttccatttttcattgacagccccacattttcttctctaaaactcaaacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctacctctttccatttttcattgacagccccacattttcttctctaaaactcaaacaa 440
Query: 241 gtcaatgtaagcatggctggcagctaaaatgattatgggataatttgagtttgccagacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtcaatgtaagcatggctggcagctaaaatgattatgggataatttgagtttgccagacc 500
Query: 301 aaacagaatccatcaccactgttcagagacccagagcattaaatggccatgaaaggatat 360
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 501 aaacagaatccatcaccactgttcggagacccagagcattaaatggccatgaaaggatat 560
Query: 361 ttctgagccttcataaaaaaggttttacaagcacataggagggaacaggtcatcaaacac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctgagccttcataaaaaaggttttacaagcacataggagggaacaggtcatcaaacac 620
Query: 421 cctctgatgt 430
||||||||||
Sbjct: 621 cctctgatgt 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
