Query= MSMg01no414_g19.b1 MSMg01no414_g19.b1 CHROMAT_FILE:
MSMg01no414_g19.b1 PHD_FILE: MSMg01no414_g19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:28 2005
(474 letters)
>mm_chr1_13920772_13921645
Length = 874
Score = 857 bits (443), Expect = 0.0
Identities = 464/471 (98%)
Strand = Plus / Minus
Query: 1 taagtcactttcaacttcatttcagagtgtgcttaatctaaaagttaatcaatctcaact 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 taagtcactttcaacttcatttcagagtgtgcttaatctaaaagttaatcaatctcaact 612
Query: 61 tagagatttaacaaaaccatagaagaatagctctgagtccaacctgcatttccctaaaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 611 tagagatttaacaaaaccatagaagaatagctctgagtccaacctgcatttccctaaaga 552
Query: 121 ctctcagggagaggaatggggttgatctctttattgaatccaggacagacaggcagcgat 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 ctctcagggagaggaacggggttgatctctttattgaatccaggacagacaggcagcgat 492
Query: 181 tcctctgatggtgcaagcctgctagcacaccgggaggcaaggtctccagctgtgcaagtg 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 tcctctgacggtgcaagcctgctagcacaccgggaggcaaggtctccagctgtgcaagtg 432
Query: 241 taaaagcaggtaactttggtcttcttatttcctagcgatcaatccttccagaaatcattg 300
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 431 taaaagcaggtaactttggtcttcttatttcctagcgatcaatccttccaggaatcattg 372
Query: 301 gaactacatctgtttagtatgccatctgatgtccttcttgttcctttgtctcctggtggt 360
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 gaactacatttgtttagtatgccatctgatgtccttcttgttcctttgtctcctggtggt 312
Query: 361 gagatgtttccaaggatttcactaaaattctacagacctcaggtctcataatcttccctt 420
||||||||||||||||||||||||||||||||| ||||||||||||| ||||| ||||||
Sbjct: 311 gagatgtttccaaggatttcactaaaattctactgacctcaggtctcttaatcctccctt 252
Query: 421 atctgcttctatctataaatatatggaggaaaacaaaagaaagaggaaaaa 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atctgcttctatctataaatatatggaggaaaacaaaagaaagaggaaaaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no414_g19.g1 MSMg01no414_g19.g1 CHROMAT_FILE:
MSMg01no414_g19.g1 PHD_FILE: MSMg01no414_g19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:28 2005
(164 letters)
>mm_chr1_13816368_13816931
Length = 564
Score = 253 bits (131), Expect = 3e-72
Identities = 155/167 (92%), Gaps = 7/167 (4%)
Strand = Plus / Plus
Query: 1 tcgtgcttcggaattttctacacagtccatacattccatagcatttg-------catact 53
||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 194 tcgtgcttcggaattttctacacagtccatacattccatagcatttgatatttgcatact 253
Query: 54 tccctttggatttaagcacgggttgttgtcactaaatgctttcagagattagccagggag 113
||||||||||||||||||| | |||||||||||||||||||||| |||||||||||||||
Sbjct: 254 tccctttggatttaagcacagtttgttgtcactaaatgctttcacagattagccagggag 313
Query: 114 tttcagggattggaagatgttatagaggagggtgagagaggaagggt 160
|||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 314 tttcagggattggaagatgttagagaggagggtaagagaggaagggt 360
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 564
Length adjustment: 8
Effective length of query: 156
Effective length of database: 556
Effective search space: 86736
Effective search space used: 86736
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
