NTCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCATTGCATATCCCACAATTAAAATAGAAACATATAGAAAAATTTT
TCAGTTGACTAGATAAAGGGTAATATGTTTACAGTCTACAATGGCTTGGG
ATGGCTCTAGGGAGAAGTAGTCAGTATCTGGATTGATTTTAAGTGATATG
ATGTGCTTATAGATCAGAAAGACTAAGGAGAAATGAAAACTCTCAAAATC
TCCAGGCAACTAGATAGATGGTTGTACCACTCATTAAACTGGAATAACAT
ATGTGATATGAGAGGCAGGCCTATAAATGGAATTGGCATACATGAACTGT
TTGATGCACATCCTCTAATTATGTAATCAAACCAGCAACTGAGTCAATGA
TGTTTTAGAGCAAGGATGAGATAATAGTGCAATGAATAGTTAGTCTTTAC
TTGTGTATCTGTATTGTAAGGAAAAAAATAAGGAGTTGTCTCATCTGGTA
AAGTGCTTTCTTGTAAGCACTAAGACCTTAGCTTGATCCCCCAAATCTCC
TCTAACAAAGAAGACTTGTGGCATGATTTTCAGTCATAACCCTAGATAGA
AGGAACTGCAGCTTTCAATAACTCAATAGCCAGTCATCCTAGCCTACTTG
GTGGATTCTAGGCTCATGANNAATGCTGACTGGANAAAACNAAAAAAAAA
AACCAAAACCAAGTGAATGGAAGCTAAAAAATGGCAGCTGAATATGGNAG
TCTCTACCTGGCCCAA

NCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCATTAGGACAAGGTTTTTACA
AGAAATGGCAAGAAAGGAGTGAGTGTTTCTCACCTGGCTGGTATCTAATT
GGAGGACTACTGTGATCTTTAACATAATTGGCTAGTGTTAGAAGCCAAAC
CATAAACTTAACATTTTCTTGGTGCTTAGCTGCTTTTGCATGTCCTCCTG
ATTGGTAGTTTTTAAAAAGTGAAATGCCAGGTTGGGTTTGTAACTTGGTG
GTGTAGATTTGTTGGGGAATAACCTGTAGACTATTGCTAGATGCTTGATT
AGTTTGGGGGTAACCTGGAGGTACAGGTCTTGTTGGTGTGTAGCCTTGAA
TTTGGTGCTAGGTACAGGCCTATTAGTCAACTTGAGTTAAACCTTAAGTC
TGTTTCTCTAAGATGGACTCTGAACCCTAATAATTTGGTGTCTCAATGAC
GCCAGTTGATATGCCAGTGTGAGTAAAGGAAATCTCACAAGGCCTCTCCC
AAAAAGAAAGGCATAGATGATTTCCCACTGGGGGGAAAAAAAGGCAAAGT
CTTCTCTAGGATGAGCCCCCTACCAGGTGAACTAATGCCAAAAGGCTATC
CCTTAGTACCTATCAATACACCCATTGGGAGGTCCCCCCCAAGATAAACC
GGGGGTATTTTCTGCCGAGAATGGCCAAATTGATGATTGGTGGACATTGG
GCCCCCCCTGCGATAAAATTCCCTAAAAGGGG

Query= MSMg01no414_h15.b1 MSMg01no414_h15.b1 CHROMAT_FILE:
MSMg01no414_h15.b1 PHD_FILE: MSMg01no414_h15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:32:31 2005
         (581 letters)



>mm_chr1_100707510_100708490
          Length = 981

 Score = 1077 bits (557), Expect = 0.0
 Identities = 575/581 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   aattaaaatagaaacatatagaaaaatttttcagttgactagataaagggtaatatgttt 60
           |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 201 aattaaaatagagacatatagaaaaaattttcagttgactagataaagggtaatatgttt 260

                                                                       
Query: 61  acagtctacaatggcttgggatggctctagggagaagtagtcagtatctggattgatttt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acagtctacaatggcttgggatggctctagggagaagtagtcagtatctggattgatttt 320

                                                                       
Query: 121 aagtgatatgatgtgcttatagatcagaaagactaaggagaaatgaaaactctcaaaatc 180
           ||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||
Sbjct: 321 aagtgatatgatgtgctgatagatcagaaagactaaggagaactgaaaactctcaaaatc 380

                                                                       
Query: 181 tccaggcaactagatagatggttgtaccactcattaaactggaataacatatgtgatatg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tccaggcaactagatagatggttgtaccactcattaaactggaataacatatgtgatatg 440

                                                                       
Query: 241 agaggcaggcctataaatggaattggcatacatgaactgtttgatgcacatcctctaatt 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agaggcagacctataaatggaattggcatacatgaactgtttgatgcacatcctctaatt 500

                                                                       
Query: 301 atgtaatcaaaccagcaactgagtcaatgatgttttagagcaaggatgagataatagtgc 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtaatcaaaccagcaactgagtcaatgatgttttagagcaaggatgagataatagtgc 560

                                                                       
Query: 361 aatgaatagttagtctttacttgtgtatctgtattgtaaggaaaaaaataaggagttgtc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aatgaatagttagtctttacttgtgtatctgtattgtaaggaaaaaaataaggagttgtc 620

                                                                       
Query: 421 tcatctggtaaagtgctttcttgtaagcactaagaccttagcttgatcccccaaatctcc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tcatctggtaaagtgctttcttgtaagcactaagaccttagcttgatcccccaaatctcc 680

                                                                       
Query: 481 tctaacaaagaagacttgtggcatgattttcagtcataaccctagatagaaggaactgca 540
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 681 tctaacaaagaagacttgtggcatgattttcagtcataactctagatagaaggaactgca 740

                                                    
Query: 541 gctttcaataactcaatagccagtcatcctagcctacttgg 581
           |||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gctttcaataactcaatagccagtcatcctagcctacttgg 781


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space:   554441
Effective search space used:   554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)