Query= MSMg01no415_f05.b1 MSMg01no415_f05.b1 CHROMAT_FILE:
MSMg01no415_f05.b1 PHD_FILE: MSMg01no415_f05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:40 2005
(447 letters)
>mm_chr1_80335189_80336036
Length = 848
Score = 806 bits (417), Expect = 0.0
Identities = 426/429 (99%), Gaps = 1/429 (0%)
Strand = Plus / Plus
Query: 20 aaaaaagagggaaggatgtggatttgacaatcacttgggtggttgattaggtagggaaat 79
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 aaaaaagagggaaggatgtggatttgacaatcacttgggtggttgattaggtagggaaat 279
Query: 80 tattcaagttcataaacctggctcactgtccaattacaaaggaaaacataatagttacct 139
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tattcaagttcataaacctggctcactgtccaattacaaaggaaaacataatagttacct 339
Query: 140 ttattggcactgtgtttctagcatttctcattttctggtgtaatctcttatttacttaaa 199
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 340 ttattggcactgtgtttctagcatttctcactttctggtgtaatctcttatttacttaaa 399
Query: 200 aaa-tcgttcataatgcaattattattaaagtatctcgtcctcctgattataccctacat 258
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 aaaatcgttcataatgcaattattattaaagtatctcgtcctcctgattataccctacat 459
Query: 259 gttaacatagagcccatttatttacataaaggtgcaagtttttacatgctgacaatatgt 318
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 460 gttaacatagagcccatttatttacataaaggtgcaagtttttacatgctgacaatatgt 519
Query: 319 cccttgcaaagtcacaattctgcatcgcttgtgcacttctttgggatgaggaattcagag 378
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 520 cccttgcaaagtcacaattctgcatcgcttgtacacttctttgggatgaggaattcagag 579
Query: 379 gccctcaagttctccaaggcaaagttacttaactcagacaatactatcgtggtctttcat 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 gccctcaagttctccaaggcaaagttacttaactcagacaatactatcgtggtctttcat 639
Query: 439 tcctcacag 447
|||||||||
Sbjct: 640 tcctcacag 648
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 848
Length adjustment: 10
Effective length of query: 437
Effective length of database: 838
Effective search space: 366206
Effective search space used: 366206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_f05.g1 MSMg01no415_f05.g1 CHROMAT_FILE:
MSMg01no415_f05.g1 PHD_FILE: MSMg01no415_f05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:40 2005
(422 letters)
>mm_chr1_80490016_80490837
Length = 822
Score = 694 bits (359), Expect = 0.0
Identities = 383/391 (97%)
Strand = Plus / Minus
Query: 32 cttctttaggcaacttcatgctgactgatgtctctggtgtccccagtagaagtgttcagt 91
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 822 cttcttaaggcaacttcatgctgactgatgtctctggtgtccccagtagaagtgttcagt 763
Query: 92 caaaggagactgagagaacatacatcactcaggctctgaaggagagtgcccagacacaga 151
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 762 caaaggagactgagagaacatacatcactcaggctctgaaggagagtgcccagacacaga 703
Query: 152 tgctcagccctgttgctgatacccttgtgaccctgagcaaggatccacactgagcctcac 211
||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 702 tgctcagccctattgctgatacacttgtgaccctgagcaaggatccacactgagcctcac 643
Query: 212 ttatttcttctggaaaatggtacaaacaatgagtatggggatcaaaacagaacacaatgt 271
||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 642 ttatttcttctggaaaatggtacaaacaatgagtaagaggatcaaaacagaacacaatgt 583
Query: 272 tcataattcagaaactggcagcagtaaatgccctgtatgtgtgagatgtaattaatagca 331
||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 582 tcataattcaggaactggcagcagtaaatgccctgtatgtgtgagctgtaattaatagca 523
Query: 332 tggtaacaaatacagctcaaatgagaaattaggcattgtgacatcaagttgtttttagta 391
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 522 tggtaacaaatacagctcaagtgagaaattaggcattgtgacatcaagttgtttttagta 463
Query: 392 atattgattcatataattgtaaaatatgtat 422
|||||||||||||||||||||||||||||||
Sbjct: 462 atattgattcatataattgtaaaatatgtat 432
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
