Query= MSMg01no415_h21.b1 MSMg01no415_h21.b1 CHROMAT_FILE:
MSMg01no415_h21.b1 PHD_FILE: MSMg01no415_h21.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:54 2005
(467 letters)
>mm_chr1_83902726_83903599
Length = 874
Score = 830 bits (429), Expect = 0.0
Identities = 455/468 (97%), Gaps = 7/468 (1%)
Strand = Plus / Minus
Query: 5 gaattccagaaatccctccttccatatggtgatgtattgagctattttcccagacacaaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 638 gaattccagaaatccctccttccatatggtgatgtattgagctattttcccagacacaaa 579
Query: 65 caacgcttatacagaaacttcaatcctatgaatcatcacctgggtaactttaatgccttt 124
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 578 caacacttatacagaaacttcaatcctatgaatcatcacctgggtaactttaatgccttt 519
Query: 125 gcttttctgtgccccagtatattaatctagagtggagggtgctttatttgactttgtctt 184
||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||
Sbjct: 518 gcttttctgtgccccagtaaattaatctagagcggagggtgctttatttgactttgtctt 459
Query: 185 cttattttttaaaatgcttgataaaatacaacacactcacagttttaaaaaatgatcccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 458 cttattttttaaaatgcttgataaaatacaacacactcacagttttaaaaaatgatcccc 399
Query: 245 aatgagttagcagttgttcttggtaagtactttgtaagtg-------tttataaataaca 297
|||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 398 aatgagttagcagttgttcttggtaagtactttgtaagtgcttattatttataaataaca 339
Query: 298 catgaaggggcatggatgtatttggtgcctaatatattccaaccccagtgagaggggaag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 338 catgaaggggcatggatgtatttggtgcctaatatattccaaccccagtgagaggggaag 279
Query: 358 ccagtgagttttcatggggctaggtcaagtgtcaaatttttctctatttttacaacattt 417
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 278 ccagtgagttttcatggggctaggtcaagtgtcaaaaatttctctatttttacaacattt 219
Query: 418 gtttcatttttatttgtgtgcatggngtgtgtgtgtgtgtgtgtgtgt 465
||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 218 gtttcatttttatttgtgtgcatggtgtgtgtgtgtgtgtgtgtgtgt 171
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 467
Length of database: 874
Length adjustment: 10
Effective length of query: 457
Effective length of database: 864
Effective search space: 394848
Effective search space used: 394848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_h21.g1 MSMg01no415_h21.g1 CHROMAT_FILE:
MSMg01no415_h21.g1 PHD_FILE: MSMg01no415_h21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:33:54 2005
(401 letters)
>mm_chr1_83680400_83681200
Length = 801
Score = 764 bits (395), Expect = 0.0
Identities = 398/399 (99%)
Strand = Plus / Plus
Query: 1 cttctaaaatgtgtaagataagctgttctctgtattcttacagtacaatgaccccaggaa 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 cttctaaaatgtgtaagataagctgttctctgtattcttacagtataatgaccccaggaa 260
Query: 61 atttatccactaagaaaaatataaatatcattgtgacagttcagcttctaacattcattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttatccactaagaaaaatataaatatcattgtgacagttcagcttctaacattcattg 320
Query: 121 atgtgtcatgatggttgggtcaatggtatcaaccatttggtcaacattattctggatgtg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgtgtcatgatggttgggtcaatggtatcaaccatttggtcaacattattctggatgtg 380
Query: 181 ttctatgaagctgcttatggatgatatctacatttaaatttgtggctctccataatatag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttctatgaagctgcttatggatgatatctacatttaaatttgtggctctccataatatag 440
Query: 241 gtggactttacttaaatatagacctgaatggaactagtaagggctcccccaaaaagaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtggactttacttaaatatagacctgaatggaactagtaagggctcccccaaaaagaaaa 500
Query: 301 ataatgttttagcaactttctattcaagttcccgtcaaataatcataagtcaacatcagg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 ataatgttttagcaactttctattcaagttcccgtcaaataatcataagtcaacatcagg 560
Query: 361 tcttccttgattgcatagtagatagcatttggcttcaca 399
|||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcttccttgattgcatagtagatagcatttggcttcaca 599
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 401
Length of database: 801
Length adjustment: 9
Effective length of query: 392
Effective length of database: 792
Effective search space: 310464
Effective search space used: 310464
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
