Query= MSMg01no415_p06.b1 MSMg01no415_p06.b1 CHROMAT_FILE:
MSMg01no415_p06.b1 PHD_FILE: MSMg01no415_p06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:28 2005
(383 letters)
>mm_chr1_24116662_24117445
Length = 784
Score = 712 bits (368), Expect = 0.0
Identities = 377/380 (99%), Gaps = 1/380 (0%)
Strand = Plus / Minus
Query: 5 gaattctaggacagccaatgttgtatagagagactatgactcaaacaaaacaaaacaaca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 639 gaattctaggacagccaatgttgtatagagagactatgactcaaacaaaacaaaacaaca 580
Query: 65 acaaaaaaacgaaacaagcaacaacaacaaaacttaaaaaattaaaagttgcaatataaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 579 acaaaaaaacgaaacaagcaacaacaacaaaacttaaaaaattaaaagttgcaatataaa 520
Query: 125 gattatatataaagatgaaaatactaaaatctatagacatttttgaaaatctagcaagtg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gattatatataaagatgaaaatactaaaatctatagacatttttgaaaatctagcaagtg 460
Query: 185 gttgtttcttctattttcttagtggctaaaactacccttgtatttattctcaattagaat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 459 gttgtttcttctattttcttagtggctaaaactacccttgtatttattctcaattagaat 400
Query: 245 tacacatgattttaatcaatttttcgggcacttttgttctagattcttaggg-ttttttt 303
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 399 tacacatgattttaatcaatttttcgggcacttttgttctagattcttagggtttttttt 340
Query: 304 ttccacatcataattttctagtttctattgtgttgtttcctgttattgagttatttagcg 363
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 ttccacatcataattctctagtttctattgtgttgtttcctgttattgagttatttagca 280
Query: 364 tagttttgttttgtttttag 383
||||||||||||||||||||
Sbjct: 279 tagttttgttttgtttttag 260
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 383
Length of database: 784
Length adjustment: 9
Effective length of query: 374
Effective length of database: 775
Effective search space: 289850
Effective search space used: 289850
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no415_p06.g1 MSMg01no415_p06.g1 CHROMAT_FILE:
MSMg01no415_p06.g1 PHD_FILE: MSMg01no415_p06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:34:28 2005
(421 letters)
>mm_chr1_23934946_23935766
Length = 821
Score = 772 bits (399), Expect = 0.0
Identities = 415/421 (98%), Gaps = 2/421 (0%)
Strand = Plus / Plus
Query: 1 caggggcatgagagacaattggcacttttaccaggtaaaatggctttgtactcagcgata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caggggcatgagagacaattggcacttttaccaggtaaaatggctttgtactcagcgata 260
Query: 61 gtaaaagctttgcactcagtgatacagtggcaatatgaagaacttgattggggaaatctg 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 gtaaaagctttgcactcagtgatacagtggcaatatgaagaacttgattgaggaaatctg 320
Query: 121 ttatcagaggaacagatggtaggactgctataataatagtccagagaagagatggtgaag 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatcagaggaacagatgataggactgctataataatagtccagagaagagatggtgaag 380
Query: 181 gcctattttaaggagatagcataggattcgagagagaga--cagaatcaagtgatgtttt 238
||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 gcctattttaaggagatagcataggattcgagagagagagacagaatcaagtgatgtttt 440
Query: 239 aaaattataagcagaaaaatttggcagctgactctatctggggggtgagaggaaggaggt 298
||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 441 aaaattagaagcagaaaaatttggcagccgactctatctggggggtgagaggaaggaggt 500
Query: 299 gagaataacaccaagacttctaagttgggagacaggtacaatagtgatgccattaaccca 358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagaataacaccaagacttctaagttgggagacaggtacaatagtgatgccattaaccca 560
Query: 359 gatcaagaagagaaagggcaagcctttcagtttcgcaacaaggtagctgagctgggggtg 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatcaagaagagaaagggcaagcctttcagtttcgcaacaaggtagctgagctgggggtg 620
Query: 419 g 419
|
Sbjct: 621 g 621
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 421
Length of database: 821
Length adjustment: 9
Effective length of query: 412
Effective length of database: 812
Effective search space: 334544
Effective search space used: 334544
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
