Query= MSMg01no417_c01.b1 MSMg01no417_c01.b1 CHROMAT_FILE:
MSMg01no417_c01.b1 PHD_FILE: MSMg01no417_c01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:55 2005
(646 letters)
>mm_chr1_30296829_30297874
Length = 1046
Score = 1226 bits (634), Expect = 0.0
Identities = 640/642 (99%)
Strand = Plus / Minus
Query: 5 gaattcatgtcctactatttactcctctatagcataaagtgttcccttagcagtgtaata 64
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 gaattcatgtcctaatatttactcctctatagcataaagtgttcccttagcagtgtaata 602
Query: 65 atgtaataaaatatacatttaatatcctgtaaatagctttatggtaatccaagatgcata 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 atgtaataaaatatacatttaatatcctgtaaatagctttatggtaatccaagatgcata 542
Query: 125 aatggctctaaatgtctgaataatattacaggcaatagtggaagaaatgagagataaaag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 aatggctctaaatgtctgaataatattacaggcaatagtggaagaaatgagagataaaag 482
Query: 185 ccacctactaggaatactggatagttacttctcacagccgaaatagcagaggagtctccc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 ccacctactaggaatactggatagttacttctcacagccgaaatagcagaggagtctccc 422
Query: 245 agatgattatgagaccacagaaacactagcacagaggggaaattggtattcttaagttga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 agatgattatgagaccacagaaacactagcacagaggggaaattggtattcttaagttga 362
Query: 305 cagaaagggaggatggtaagaaacctttccaataatgcatctttacctacaacagtctat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 cagaaagggaggatggtaagaaacctttccaataatgcatctttacctacaacagtctat 302
Query: 365 tgactgaatattttcacagcataatgacaatacaatagttaaaagttggaggaattctgg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgactgaatattttcacagcataatgacaatacaatagttaaaagttggaggaattctgg 242
Query: 425 gatgtgaattcttcatgaattgtgtttacttctacaaaaaattccctttcaaggtctata 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 241 gatgtgaattcttcatgaattgtgtttacttctacaaaaaattccctttcaaggtctata 182
Query: 485 aagaattgtattagaattttgttaggaattgcattgaatcttcagattgcttttggtaag 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 181 aagaattgtattagaattttgttaggaattgcattgaatcttcagattgcttttggtaag 122
Query: 545 atggccatttttactatgttaatcctactgatctgtgagcatgaaagatctttcaatctt 604
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 121 atggccatttttactatgttaatcctactgatctgtgagcatgaaagatctttctatctt 62
Query: 605 ctgatatctacctcaacttttttcttcagagatttaagtttc 646
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 61 ctgatatctacctcaacttttttcttcagagatttaagtttc 20
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 646
Length of database: 1046
Length adjustment: 10
Effective length of query: 636
Effective length of database: 1036
Effective search space: 658896
Effective search space used: 658896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_c01.g1 MSMg01no417_c01.g1 CHROMAT_FILE:
MSMg01no417_c01.g1 PHD_FILE: MSMg01no417_c01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:35:55 2005
(516 letters)
>mm_chr1_30082603_30083518
Length = 916
Score = 893 bits (462), Expect = 0.0
Identities = 469/472 (99%), Gaps = 2/472 (0%)
Strand = Plus / Plus
Query: 47 tatatatatatatatatatatat--gctaatatcaaaccatcaaatctaatataaatatt 104
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 245 tatatatatatatatatatatatgcgctaatatcaaaccatcaaatctaatataaatatt 304
Query: 105 tggaatggtttttgactaactccttaaaagaacatattaaaaataagctcttgagagaat 164
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 tggaatggtttttaactaactccttaaaagaacatattaaaaataagctcttgagagaat 364
Query: 165 tatttgcatttttgtaacaatgtgtggtttaacatcctaaataaagaaacaggaccattc 224
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 tatttgcatttttgtaacaatgtgtggtttaacatcctaaataaagaaacaggaccattc 424
Query: 225 tatccctcattagtatgtcaggattcttccacacttccatttagcatctttaaatggtgt 284
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tatccctcattagtatgtcaggattcttccacacttccatttagcatctttaaatggtgt 484
Query: 285 tatcttctgttacaactggagaattttttgtctaacagtcaatttccacttaaagaatga 344
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 tatcttctgttacaactggagaattttttgtctaacagtcaatttccacttaaagaatga 544
Query: 345 accagggtttatgggtgcagctgtaagcaactaataaaacaagaaactaaaatttaatgg 404
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 accagggtttatgggtgcagctgtaagcaactaataaaacaagaaactaaaatttaatgg 604
Query: 405 atcaaacataaatttcccttcagttttattgtccaaccttgacttttcgaaatgagctct 464
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 atcaaacataaatttcccttcagttttattgtccaaccttgacttttcgaaatgagctct 664
Query: 465 ctgtgtgatttctgagtttgaatttggtaaaataggtagtctgcatatacca 516
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgtgtgatttctgagtttgaatttggtaaaataggtagtctgcatatacca 716
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 60
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 516
Length of database: 916
Length adjustment: 10
Effective length of query: 506
Effective length of database: 906
Effective search space: 458436
Effective search space used: 458436
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
