Query= MSMg01no417_d01.b1 MSMg01no417_d01.b1 CHROMAT_FILE:
MSMg01no417_d01.b1 PHD_FILE: MSMg01no417_d01.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:00 2005
(570 letters)
>mm_chr1_187867155_187868124
Length = 970
Score = 1029 bits (532), Expect = 0.0
Identities = 561/572 (98%), Gaps = 4/572 (0%)
Strand = Plus / Plus
Query: 1 tgttttccagtattgattcggttcatctatacattctttgtgagccttcacaggaccatc 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tgttttccagtattgattcggttcatctatacattctttgtgagccttcacaggaccagc 260
Query: 61 atcagaagccatgtcccacagttatcttctgcctacccccaaactgcatctagttgttgt 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atcagaagccatgtctcacagttatcttctgcctacccccaaactgcatctagttgttgt 320
Query: 121 ggattcagtgtagactcataatcatcacttttttttttaccatcatacaatactattgca 180
|||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 321 ggattcagtgtagattcataatcatcactttttttt--accatcatacaatactattgca 378
Query: 181 cactcttgagtcacatttattatttatttgtctatgactcatcttctcaagaactccttg 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 cactcttgagtcatatttattatttatttgtctatgactcatcttctcaagaactccttg 438
Query: 241 acaaaggagctcacatcacactgtttacttcagagcttccctgggggccggactcccaac 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 439 acaaaggagctcacatcacactgtttacttcagagcttccctgggggccggactcccaac 498
Query: 301 tttaacataagagaaatgtgataaacttttattgtctcagtgtttggcttacaacatatc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 tttaacataagagaaatgtgataaacttttattgtctcagtgtttggcttacaacatatc 558
Query: 361 atataacctgctgctctgaatccatgcaatcaaggaaagaaacactaggcagactgagag 420
|||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 559 atataacccgctgctctgaatccatgcaatcaaggaaggaaacactaggcagactgagag 618
Query: 421 aatagtctgtgtataccccagggctgtacccaggctgggataaccctgcagacattcttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 aatagtctgtgtataccccagggctgtacccaggctgggataaccctgcagacattcttt 678
Query: 481 ctctccatcccagtttattgtcagtgcttcttctcaaggaagaacacaca--aaaaaacc 538
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
Sbjct: 679 ctctccatcccagtttattgtcagtgcttcttctcaaggaagaacacacacaaaaaaaac 738
Query: 539 gtgaaactaagaaaagcaaatggaaacttcaa 570
||||||||||||||||||||||||||||||||
Sbjct: 739 gtgaaactaagaaaagcaaatggaaacttcaa 770
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 570
Length of database: 970
Length adjustment: 10
Effective length of query: 560
Effective length of database: 960
Effective search space: 537600
Effective search space used: 537600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no417_d01.g1 MSMg01no417_d01.g1 CHROMAT_FILE:
MSMg01no417_d01.g1 PHD_FILE: MSMg01no417_d01.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:36:00 2005
(179 letters)
>mm_chr10_32845313_32845891
Length = 579
Score = 331 bits (171), Expect = 2e-95
Identities = 177/179 (98%)
Strand = Plus / Plus
Query: 1 gagcttatagtctcctatgtaaccccaattatcattggaatgaaaaagtggcttaatctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gagcttatagtctcctatgtaaccccaattatcattggaatgaaaaagtggcttaatctc 260
Query: 61 agcatttctgaattctatgtacacagcaaattaatgaatggatagagcaaaaggaatttt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 261 agcatttctgaattctatgtacacagcaaattaatgaatggatagagcaaaaggaaattt 320
Query: 121 tcccttatagtgacattttgaaacagctatgtttgtatggatgaatttttattaccacc 179
||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcccttagagtgacattttgaaacagctatgtttgtatggatgaatttttattaccacc 379
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 179
Length of database: 579
Length adjustment: 8
Effective length of query: 171
Effective length of database: 571
Effective search space: 97641
Effective search space used: 97641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
