Query= MSMg01no418_b08.b1 MSMg01no418_b08.b1 CHROMAT_FILE:
MSMg01no418_b08.b1 PHD_FILE: MSMg01no418_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:11 2005
(587 letters)
>mm_chr1_79384385_79385371
Length = 987
Score = 1112 bits (575), Expect = 0.0
Identities = 584/587 (99%)
Strand = Plus / Minus
Query: 1 gaatgcagtgatccattacaagcctttgcctgcctgacaattctatcattttcatagcat 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 787 gaatgcagtgatccattacaagcctttgcctgcctgacaattctatcgttttcatagcat 728
Query: 61 ctcaggtccttgcagacttaccttgtatgacatcagaacaaaccatacatggctctgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 727 ctcaggtccttgcagacttaccttgtatgacatcagaacaaaccatacatggctctgtat 668
Query: 121 gagaatgcatgtcaagcatacagttgaggggaacattaagaaaaggttggagaaacagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 gagaatgcatgtcaagcatacagttgaggggaacattaagaaaaggttggagaaacagtt 608
Query: 181 tatcttactcttagattgcctgtccaggtctcagaactaaattacagggtatccatagta 240
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 tatcttactcttggattgcctgtccaggtctcagaactaaattacagggtatccatagta 548
Query: 241 caacatacaatatagagacttagaatgactgtaaatatatatttagttacattaaaaatg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 caacatacaatatagagacttagaatgactgtaaatatatatttagttacattaaaaatg 488
Query: 301 tacacattttattgttgagtgaaaaggcaaattataacatattctttcagggtgatttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 tacacattttattgttgagtgaaaaggcaaattataacatattctttcagggtgatttca 428
Query: 361 tttgtaaagttgatacacaaatggatacatgtaaacttttatcttcatacacatgtatat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 tttgtaaagttgatacacaaatggatacatgtaaacttttatcttcatacacatgtatat 368
Query: 421 taatgcttaccaaataatgaaataatagaagatttcaactaaattactgatggtgagcaa 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 taatgcttaccaaataatgaaataatagaagatttcaactaaattactgatggtgagcaa 308
Query: 481 catgaatatgtagcctcagaaagcagtaagatctttctttgccattttctccctcataga 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 catgaatatgtagcctcagaaagcagtaagatctttctttgccattttctccctcataga 248
Query: 541 tatttacttttttatgctgctgctggtttttgagacaagctgctctt 587
|||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 tatttatttttttatgctgctgctggtttttgagacaagctgctctt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no418_b08.g1 MSMg01no418_b08.g1 CHROMAT_FILE:
MSMg01no418_b08.g1 PHD_FILE: MSMg01no418_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:11 2005
(611 letters)
>mm_chr1_79259972_79260982
Length = 1011
Score = 1071 bits (554), Expect = 0.0
Identities = 595/620 (95%), Gaps = 19/620 (3%)
Strand = Plus / Plus
Query: 1 tttcagtgcctctaatgagaagagcacccagtggagagatgtgaggcacagaagattcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttcagtgcctctaatgagaagagcacccagtggagagatgtgaggcacagaagattcag 260
Query: 61 gaaaggacatctttagattcaagtggctctttacatgcaccagctgtagagtaccttgtt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaaggacatctttagattcaagtggctctttacatgcaccagctgtagag--------- 311
Query: 121 gctcctatctaaagctaagtccctttcttgatgaagacctgggtctccaatgtcatagtt 180
|||||||||||||||||||| |||||||||| |||||||||||||||| ||||||||||
Sbjct: 312 -ctcctatctaaagctaagtctctttcttgataaagacctgggtctccagtgtcatagtt 370
Query: 181 ttcatcacactcaggatagctttaattaattctgtctcacacacacttgatgaaaacaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 ttcatcacactcaggatagctttaattaattctgtctcacacacacttgatgaaaacaaa 430
Query: 241 cctttgcaatgccataggcagaagtc---------gctgcagtcctgaaatgtgatcctg 291
|||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 431 cctttgcaatgccataggcagaagtcctgcaggtcgctgcagtcctgaaatgtgatcctg 490
Query: 292 cttctcttgtatgagtatttatgatacacttgaattttaacaaggcttcattcaagaaaa 351
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 491 cttctcttgtatgagtatttatgatacacttgagttttaacaaggcttcattcaagaaaa 550
Query: 352 gcaaatgagagtcctggctaattcttcttcataccccatgtaaatcagacagcatctgga 411
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 gcaaatgagagtcctggctaattcttcttcataccccatgtaaatcagacagcatctgga 610
Query: 412 gaatctcatgtgtgttgtgagaaacctttgttgacacctattgtaagagcactagccaat 471
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 611 gaatctcatgtgtgttgtgagaaacctttgttgacacctattgtaagaacattagccaat 670
Query: 472 tttttggcataaaatgctcatgccaactaaataatatcattcatgctttccatggtctgt 531
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 tttttggcataaaatgctcatgccaactaaataatatcattcatgctttccatggtctgt 730
Query: 532 gtttcagtacagttgctttaatgtcaaagacattgtgacaaggctgtgttgatctataaa 591
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 731 gtttcagtacagttgctttaatgtcaaagacattgtgacaaggctgtgttgatctataaa 790
Query: 592 agcactttgatctggtatat 611
||||||||||||||||||||
Sbjct: 791 agcactttgatctggtatat 810
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
