XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTCTTCGTTTCTTANAGCTTCAGGGGTATGATTGCTAACATTTTCC
TGATAATCATCACTCTAGGCATCTTATAGGTTTTGCAATACATATGTATC
AAGAACTGTTCTTCTCTTGAATGTTTCAAGTGTTACAAAGATGGTTCTCA
GTTGAGTGTGGTCATCTGATGGACATGCCATGTGGTAGAACATAGGGAGT
TTTTAAACAATTGGAGGATCTAGCCCTATTTTGTAACCGGTTTTGGCTAT
TTAGAAGGAAATGTTATGAAATATTGAGCCTTGACTCACAGGATATTACT
TGAATTTCTATATGCTATCTTCATGAGGATCATGTCACATGACCTCCAGC
CATTACAACCCAGCATAGTAATGCAGCGCAGATGAGATAGGGTCTTGTTA
CAGACTATATGTCATATGATTTGGACTTTAAGGATCAAAAGCATGAGCAA
AATAACCCTTTTTTTTTAAGTAGTCAGCCTCAGGCGCTTTGTTGGAATAA
GGCATAAATAGACTATTCTGTGAGAGACTAAAAGTTACAGAAATCATGAA
AAGGTAGGCTAAATTTTACACTTCCTTGGAAAAACCCAGAACTCCACCTT
TTTCTTCTCTACTTGTGGGCTGTGCACCACAAAGGTTTTTACCAAAAATT
CTGTTCTTTTCCGGTAAAAAGGTTTCCCCACAAGTTATCATATTGTGCCT
TGTAACAAGAATTTTCCTTGTCTT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAGGACCGCCAGAGCTATACAGAGAAAT
CCTGTCTCGATAAACCAAAAAAAAAAAAATAAAATAAAATAAAATTTTCT
TTTTTTGTTATGATTATACTATGATTGCATCTTTTTCTTCTCCTCTCCTC
CCTCCAAACTTATTACACCACTCTTTGCTCTTTTCGTAACTCATGGCCTC
CTTTTCCCATTAACTGTTGGGAATGCTTTTGTATGTGTGTGTGTGTGTGT
ATATATATGTATATATATATATATATATATATGTANATANANANACACAC
ACACACATATATTACCACCCCCCACATATAGTTAAAAAAAAACAATATAA
TTTAAAAAAATATAAAAAAGTGTGATAATATAATAAATATGCGCATATTA
ATAAAAAAATACGCCAAAACAGAATTTTATATATCAAAAAAAGATAATTT
TCTTTGTTATATTCATCAATATATATGAGAGAAAAAGAGAGAGGATCTCA
GTATAAAGATGGCGTTTCCAGAAATCCGCGTTACTTTCTTTATTGTCTAC
TATATGATGTAAACTTTATGGTCAAGAGGAATATTATCAAATAATATATA
ATCTAATATATTTATTTTAATAATTCCCTAATTTTTTTATTATATTCTTT
TAATTATTAAACTTTCATTCACTATAATCGTATTTATAATCTTTCTCATA
TTTTTGTAAN

Query= MSMg01no418_i20.b1 MSMg01no418_i20.b1 CHROMAT_FILE:
MSMg01no418_i20.b1 PHD_FILE: MSMg01no418_i20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:37:47 2005
         (512 letters)



>mm_chr1_150913923_150914836
          Length = 914

 Score =  924 bits (478), Expect = 0.0
 Identities = 502/511 (98%), Gaps = 2/511 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcttcgtttcttanagcttcaggggtatgattgctaacattttcctgataatc 63
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcttcgtttcttaaagcttcaggggtatgattgctaacattttcctgataatc 263

                                                                       
Query: 64  atcactctaggcatcttataggttttgcaatacatatgtatcaagaactgttcttctctt 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 atcactctaggcatcttataggttttgcaatacatatgtatcaagaactgttcttctctt 323

                                                                       
Query: 124 gaatgtttcaagtgttacaaagatggttctcagttgagtgtggtcatctgatggacatgc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gaatgtttcaagtgttacaaagatggttctcagttgagtgtggtcatctgatggacatgc 383

                                                                       
Query: 184 catgtggtagaacatagggagtttttaaacaattggaggatctagccctattttgtaacc 243
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 384 tatgtggtagaacatagggagtttttaaacaattggaggatctagccctattttgttacc 443

                                                                       
Query: 244 ggttttggctatttagaaggaaatgttatgaaatattgagccttgactcacaggatatta 303
           ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ggttttggctatttagaagaaaatgttatgaaatattgagccttgactcacaggatatta 503

                                                                       
Query: 304 cttgaatttctatatgctatcttcatgaggatcatgtcacatgacctccagccattacaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cttgaatttctatatgctatcttcatgaggatcatgtcacatgacctccagccattacaa 563

                                                                       
Query: 364 cccagcatagtaatgcagcgcagatgagatagggtcttgttacagactatatgtcatatg 423
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 cccagcatattaatgcagcgcagatgagatagggtcttgttacagactatatgtcatatg 623

                                                                       
Query: 424 atttggactttaaggatcaaaagcatgagcaaaataacccttttt--ttttaagtagtca 481
           |||||||||||||||||||||||||||||||||||||||||||||  |||||||||||| 
Sbjct: 624 atttggactttaaggatcaaaagcatgagcaaaataaccctttttgtttttaagtagtct 683

                                          
Query: 482 gcctcaggcgctttgttggaataaggcataa 512
           ||||||||| |||||||||||||||||||||
Sbjct: 684 gcctcaggcactttgttggaataaggcataa 714


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 914
Length adjustment: 10
Effective length of query: 502
Effective length of database: 904
Effective search space:   453808
Effective search space used:   453808
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)