Query= MSMg01no419_l09.b1 MSMg01no419_l09.b1 CHROMAT_FILE:
MSMg01no419_l09.b1 PHD_FILE: MSMg01no419_l09.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:20 2005
(268 letters)
>mm_chr1_128647908_128648576
Length = 669
Score = 462 bits (239), Expect = e-135
Identities = 260/269 (96%), Gaps = 5/269 (1%)
Strand = Plus / Minus
Query: 1 ccagatcttcatgagcgtgctgcaagcattttcctaactgagccatcttcccagaccatg 60
|||||||||||||||| |||||||||||||||| |||||||||||||||||||||||
Sbjct: 522 ccagatcttcatgagcatgctgcaagcattttc----ctgagccatcttcccagaccatg 467
Query: 61 ttgagttttttggtacctgatgacagatagatacattaggttgatttctaaaaggtttgg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 466 ttgagttttttggtacctgatgacagatagatacattaggttgatttctaaaaggtttgg 407
Query: 121 ggaagaggcacagagaatac-atgatttggtcctaaggatatgttcttcctgggtcatgc 179
||||||||||||||||| || | || ||||||||||||||||||||||||||||||||||
Sbjct: 406 ggaagaggcacagagaagacaaggacttggtcctaaggatatgttcttcctgggtcatgc 347
Query: 180 atttacacgtgtgcctgggcctggtcttagaaaacagtgacaagtgttctctctgccagt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 346 atttacacgtgtgcctgggcctggtcttagaaaacagtgacaagtgttctctctgccagt 287
Query: 240 ggttgttcaaaatggatgctccacaggca 268
|||||||||||||||||||||||||||||
Sbjct: 286 ggttgttcaaaatggatgctccacaggca 258
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 268
Length of database: 669
Length adjustment: 9
Effective length of query: 259
Effective length of database: 660
Effective search space: 170940
Effective search space used: 170940
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no419_l09.g1 MSMg01no419_l09.g1 CHROMAT_FILE:
MSMg01no419_l09.g1 PHD_FILE: MSMg01no419_l09.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:20 2005
(250 letters)
>mm_chr1_128470899_128471548
Length = 650
Score = 484 bits (250), Expect = e-141
Identities = 250/250 (100%)
Strand = Plus / Plus
Query: 1 ctgagcacacatctctctcagttcaaaatggtaaggggctcttagtcttgccatttcatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgagcacacatctctctcagttcaaaatggtaaggggctcttagtcttgccatttcatg 260
Query: 61 tcctcggagctatcctaggtgatgggggcggggttggagtgaacgattttctgggttgcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcctcggagctatcctaggtgatgggggcggggttggagtgaacgattttctgggttgcc 320
Query: 121 ccatcttgaactgcagatgtgtgtaaaatggattccatccaagactaggagaaatggctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccatcttgaactgcagatgtgtgtaaaatggattccatccaagactaggagaaatggctc 380
Query: 181 aaggatggagatggtatcagccttttatgtcaactgaaggtacgacagttagtaggattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaggatggagatggtatcagccttttatgtcaactgaaggtacgacagttagtaggattt 440
Query: 241 gctgtgtatt 250
||||||||||
Sbjct: 441 gctgtgtatt 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
