NTCAAATTTGNGNCGCTATAAAANCACGGTCGCAGCGGTACGAGGAAACA
GGCTTACGCAGCAGCTTAGTCAGGGGGACGGGCCTNNNAANTTTTTATTT
TTTTCCACAAAAAGAGAAAACNAAAAAACAAAACTGNNNNNNAAANNNNN
NNAAAAAAAAACNNNCCCCCCNAAAAAANNCCCTCCCCCCCCCCCCCNNN
NNCTTTTCCCCCACAAACAAATAATTTTCCCAAAAAACCCCGGCGAAACA
CCCNAAAAAAACCCTAATTCCCCCNCNNNCCATTTTTTCCTCCCCANATT
TTTTCCTNTTTTNNCNCCCATTTAAACCCCCCCCCNNTNCTCCCCACACC
CCCCCCNCCNNCCCNNCCNNCCCCCCCCCCCCTTTCCCTTCCCCCTTTCC
CCCCCCCCTTTTCCTNCCCCCCCCCCCCTTCCNNCCCCCCCCCCCCCCCC
CTTTCCCCTTTTCCCCCCTTTTCCTTTTTCCCCCCCCCCCCCCCCCCNNC
TCNTTCCCCCCTTTCCTTTCCCCNNCCCCCCCCACTTACCCCCCCCCCCC
TTTTCCCCCCCCCCCCCCTACCCCCCCCTTTTTTTTCCCCCCCNCCCCTC
CCTTNTTTTTTTTTTTTTCCCTTCTTCCTCTCCCCNCCNNCCNNCTTTTC
CCCCCCTTTCTCCCCCCCCCCCNNTTCTTTCCCCCCCCCTCCCCCCACCA
NCCCCCCCCCTCTTTTATTCCCNTNTNNCCCCTTCTTTTTCCTTTTTAAA
TTATACCCCCCCCCCTAATCTACCCCCCTTATAATATATATATTCATAAT
G

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATCTGAAAAGTGAGATAGCAACATCTTAG
GCATATATATTAAACAGCTGACATTAAGCTTCCTTAAACTTTGCACTTTT
TATCTCCTTGATTTTGCCTCTAATCCTGATGCTTTATGATTCGCTTGACT
ATATGTTCTTGTTCTCATAGACCTCAGCTTCTTCCTTCAAACCATTATTC
CTTAATTTTTAGTGGTGGTTGTGAGTTTTAGAAGCTATATTAAGTAGAAT
AGATTAATGAAACAGCAATGCCCAATAATCAAAGTGAAAGCATATTACTA
TTTACTTATTTAAAAGATTACATCTAGGTTTATTTCCTTTTCATGTAAAG
TGCAAGACAATTTCACGTATCAGGACACTGTGGTTCGGTTTCTGATACAA
AGGACATGCAGATGTTGGCACATAGATGAATATATTTGGGGTTTATATCT
CAATTCTATCACAACATAAAAGCCTCATCCTATACAAGAGTATTTCATTG
AAAAGGTACAAGAGTGAAAAGATATAGTGAACTTGAACTTTCCCATTCTT
CTTCCTTCTGTGCAGGNGGAAGATGCCATAAGTCTTGCACTGGCCGATGC
TGGGGACCCACAGAAAACACTGCCCGAACTGGAAGTTTGCAATATAATAT
GGCTTGAGAAGGTCCGAAATTTATCATGGAACCCCCCCCCCATCTG

Query= MSMg01no419_o03.g1 MSMg01no419_o03.g1 CHROMAT_FILE:
MSMg01no419_o03.g1 PHD_FILE: MSMg01no419_o03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:39:33 2005
         (537 letters)



>mm_chr1_68416903_68417839
          Length = 937

 Score = 1038 bits (537), Expect = 0.0
 Identities = 537/537 (100%)
 Strand = Plus / Minus

                                                                       
Query: 1   catctgaaaagtgagatagcaacatcttaggcatatatattaaacagctgacattaagct 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 737 catctgaaaagtgagatagcaacatcttaggcatatatattaaacagctgacattaagct 678

                                                                       
Query: 61  tccttaaactttgcactttttatctccttgattttgcctctaatcctgatgctttatgat 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 677 tccttaaactttgcactttttatctccttgattttgcctctaatcctgatgctttatgat 618

                                                                       
Query: 121 tcgcttgactatatgttcttgttctcatagacctcagcttcttccttcaaaccattattc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 617 tcgcttgactatatgttcttgttctcatagacctcagcttcttccttcaaaccattattc 558

                                                                       
Query: 181 cttaatttttagtggtggttgtgagttttagaagctatattaagtagaatagattaatga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 557 cttaatttttagtggtggttgtgagttttagaagctatattaagtagaatagattaatga 498

                                                                       
Query: 241 aacagcaatgcccaataatcaaagtgaaagcatattactatttacttatttaaaagatta 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 497 aacagcaatgcccaataatcaaagtgaaagcatattactatttacttatttaaaagatta 438

                                                                       
Query: 301 catctaggtttatttccttttcatgtaaagtgcaagacaatttcacgtatcaggacactg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 catctaggtttatttccttttcatgtaaagtgcaagacaatttcacgtatcaggacactg 378

                                                                       
Query: 361 tggttcggtttctgatacaaaggacatgcagatgttggcacatagatgaatatatttggg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggttcggtttctgatacaaaggacatgcagatgttggcacatagatgaatatatttggg 318

                                                                       
Query: 421 gtttatatctcaattctatcacaacataaaagcctcatcctatacaagagtatttcattg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 gtttatatctcaattctatcacaacataaaagcctcatcctatacaagagtatttcattg 258

                                                                    
Query: 481 aaaaggtacaagagtgaaaagatatagtgaacttgaactttcccattcttcttcctt 537
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 257 aaaaggtacaagagtgaaaagatatagtgaacttgaactttcccattcttcttcctt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 537
Length of database: 937
Length adjustment: 10
Effective length of query: 527
Effective length of database: 927
Effective search space:   488529
Effective search space used:   488529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)