NTTTATCTAAAATTGGGGGGGGTAANGAGNNCCAAATTCAAAACACGCGG
GGAANNCCCATTACAACACGGACGNAAAAGNGAGGAGGGNGTCTCACAAA
CTCTGGCTAGAGTCCGTCCCGGGCTGGGCCCGAGATCTGAGAAAAGGGCG
CGTATAAACTCCCCAAAAAATGAGCTTAAGGCCATTTTAATACAAGCTGA
CAGCTCCGGAATCCGGTCCAGAACGGTCCCCCGAAAACCCCAAAACGTTT
CTCTCCTGGCAAACCAAACCCCAGGTTTTTATTTGCATATTAGTTCAGTC
ATTTACTCTGGCTCTCTTCCATTTATCTCATAAATTAACATTTTATGATC
TTAGCCCCTTGACTCTTAGAAAGGGACAGCAAGTTCTTTTTTTTTATTAT
TTATTTTATTTTATTTTATTTTATTTATATGAGTACACTTTAGCTGTCTT
CAGACACACCAGAAGAGGGCATCAGATCCCGTTACAGCTGGTTGTCGACC
ACCATGTGTTTGCTGGGACATTAACTCAGGATCTCTGGAAGAGCATCCTT
TAACCTTTGAGCCATCTCTCCCGCCCCTTAGTTTATTATACATATAAAAC
CAATTCCCCCGAACCCCAAGATCTGGCCGGCCTTTGCAGTTCATTTTTTA
TGTTAAATTGGCGGGGAACCTGGTTCTAAAAATACATTCTCCCCCGGCTG
GGACCCAAATTTTCGGCCCCCGCCGGCCTTTAATN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXCAGATGGATGTTAGGGCTTGTGAGGTCCCTG
GACCACAGCATGTAGCCAGCACTTCACTGGGGTCCACAGTGCTGGCTTTT
AGGGTCAGTGAGTGGCATCCTTCCCTCTGACTTCAGACGGAGCTCAAGGT
CACCCTCAGAGCTGCATTCCAGGTTTGGGAATGACTCTCTAGCTCTTTGC
CCATCGTCTAGTCCTCTTACTGGGCTGAGGGAGAGCTGGTTTTGTGCCCA
GCTGCTGCACTTTGCCTCCCCATCCCCTTGGTCTGAGCAAAGGGAGTGAA
CAGGGCTGGGTGGGGAGGGGAGAGCCAGGGGAGAACTGGCTCTGGGTTGG
AGGGAGCTTGGGGCAGAGGGTCTGGAGCATTCTGGTGAGTCTTCCTCAGC
AGAGCCAGAGGCTGGCTATCAAGGCTCTGTGGGTTTCCTAGGGACCTGGG
GAGGAGGCAAATGCTGTTCCCATATAGTTGGCCAGTACACTCAAGGTTGC
CTTTCAGCAAGATCATACACCTACTATTCTATCTTGCCTTTTCCACCTTG
TTTTATCTGTGTTGTGTTCCCGTGACCTTTTTCTTCCCTTATCACACCTC
TTCTTTTAGGCACTCTGTTCTATCTCACTTCTCTTTCTGTTCGCCCTTAT
CCTCCTCCTCTTTTTTTCCCCTTCTCCTCAAGTCCTTCCTTTTTATTTCC
TGTCGCTC

Query= MSMg01no420_p07.g1 MSMg01no420_p07.g1 CHROMAT_FILE:
MSMg01no420_p07.g1 PHD_FILE: MSMg01no420_p07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:57 2005
         (462 letters)



>mm_chr1_91323701_91324563
          Length = 863

 Score =  820 bits (424), Expect = 0.0
 Identities = 454/464 (97%), Gaps = 3/464 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagatggatgttagggcttgtgaggtccctggaccacagcatgtagccagcacttcactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 cagatggatgttagggcttgtgaggtccctggaccacagcatgtagccagcacttcactg 604

                                                                       
Query: 61  gggtccacagtgctggcttttagggtcagtgagtggcatccttccctctgacttcagacg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 603 gggtccacagtgctggcttttagggtcagtgagtggcatccttccctctgacttcagacg 544

                                                                       
Query: 121 gagctcaaggtcaccctcagagctgcattccaggtttgggaatgactctctagctctttg 180
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 gagctcaaggtcatcctcagagctgcattccaggtttgggaatgactctctagctctttg 484

                                                                       
Query: 181 cccatcgtctagtcctcttactgggctgagggagagct-ggttttgtgcccagctgctgc 239
           |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||
Sbjct: 483 cccatcgtctagtcctcttactgggctgagggagagctagg-tttgtgcccagctgctgc 425

                                                                       
Query: 240 actttgcctccccatccccttggtctgagcaaagggagtgaacagggctgggtggggagg 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 424 actttgcctccccatccccttggtctgagcaaagggagtgaacagggctgggtggagagg 365

                                                                       
Query: 300 ggagagccaggggagaactggctctgggttggagggagcttggggcagagggtctggagc 359
           |||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 364 ggagagccagggaagaactggctctgggctggagggagcttggggcagagggtctggagc 305

                                                                       
Query: 360 attctggtgagtcttcctcagcagagccagaggctggctatcaaggctctgtgggtttcc 419
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 attctggcgagtcttcctcagcagagccagaggctggctatcaaggctctgtgggtttcc 245

                                                       
Query: 420 -tagggacctggggaggaggcaaatgctgttcccatatagttgg 462
            |||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 244 ttagggacctggggaggagacaaatgctgttcccataaagttgg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 462
Length of database: 863
Length adjustment: 10
Effective length of query: 452
Effective length of database: 853
Effective search space:   385556
Effective search space used:   385556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)