CACCAATCCTAGTTGCGGGGNAAGANGANTTTTCTTCAGAGAGGGGGGGN
AANNCTTACTTCCAATAAAGGGAGGGAGGGAAAGCCAGGGCAACCGGCTG
GTTAAAAGGCAGTTGGCCCTAAAGGCAAAAATTGCTTCAGAAGGAAAATC
CAGTGGGGGATGAATTTGAGGGTAAAGAAGGATCTGGAAAGCTCTAACCA
GCAGGGAGGGGCTTTCCCCGCTCTGGGATGCAGGCCAAAGCTGTGTTTAT
TTAACAAACCATGCAGAAAGGGAGCAAGCACCAACTGACCCGAAGGTGAA
GGCCTCTCATTAATCCTTTTACATAAAATTTTTAAGGTGCTTCAAACAAC
CCTCTAAGATTTCTTAAAAGCTACTTGGGATTTCCCATTGAGGTTAAACA
ACCCGAGTGAAAGAAAAGAGAAGTGTATTGGGATGGGAAACGGAGAGAGA
GAAAGAGGAGGGATGGAGATGGAAGCCGCGGCAAACTCCCCCTCCTTTCC
CCCCCTTCCCACCTTTTCCCCTCCTTTCTACCCCCACCCTTCTTTTACCC
CCTTCCTTATACCCCCTTTTTAAACCCGTCCACACCTCTCTCTCCCCACC
GTCTTCTCCCCCTTTTCCTCCCCCTTTCTCCCCCCCCTCCCTTCCACTTT
TTTTTTTTTTTCTCTTTTGCACCCCTCCCCCTTCCCCCTCCCGCCCGTTT
TCCCTCTCCTTTCCTCCGCTTTCCTCCTATTTCCCCCACTG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXTCTCATCTTCTGAAATTATTTGTATTTGTTTAGGTCA
ATCCAATTCCAATCAATTCATAAAGCCTTTTGGGGTGTTTGAAGATGAAG
AATCAGTGAAAGGTAAAAAATGAAACAAGACATTTTAAGATAAATGAATT
TTCATTTCCTAATTAGTGGGGTTTCTCAAGAATTTTAATGCATACTTATC
AATTTCAAACAAAAAGGATAAATAACATTTAGACATATGTGTACACATAA
ATATCACACATATCTTATGTATATTTTTAAAAAGTACATTTGAATACTGA
GAGAACTAGTTCCTCAAATAATGTTTCCAAACTTGCCCAAAGATCTAAAT
GATGCAATACTCTTATTAACAGTACAGAGAAGGGACTTAAGAGATGACTC
AGCATAGTAATTGTCCTGCAAACATGAAGAACTTGAGTTTGTATCCCAAC
ACCCAGATAAAAGCTAGGCATGTACCCCTATAATCCCACTACTGGGGTGA
GCAGACAAAAGTGTATTCCAGGGGCTTTCTGATGAGGTATTCTAGTTGAT
CTAGCCAATTTGGTTTCTGTAAGAGAACCTGACTCTTGTGTGTGAGAGTG
ATTACACACAAAAATACTAATACTTACATGAATACATATACTTGTATATA
ATACCATACACCGAGAGAGATTAATAGAAAGCGTGAAAGCATTGCTTAAN

Query= MSMg01no420_p14.g1 MSMg01no420_p14.g1 CHROMAT_FILE:
MSMg01no420_p14.g1 PHD_FILE: MSMg01no420_p14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:40:58 2005
         (586 letters)



>mm_chr1_43973464_43974450
          Length = 987

 Score = 1058 bits (547), Expect = 0.0
 Identities = 578/591 (97%), Gaps = 9/591 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   tctcatcttctgaaattatttgtatttgtttaggtcaatccaattccaatcaattcataa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 tctcatcttctgaaattatttgtatttgtttaggtcaatccaattccaatcaattcataa 728

                                                                       
Query: 61  agccttttggggtgtttgaagatgaagaatcagtgaaaggt-aaaaaatgaaacaagaca 119
           ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 727 agccttttggggtgtttgaagatgaagaatcagtgaaaggtaaaaaaatgaaacaagaca 668

                                                                       
Query: 120 ttttaagataaatgaattttcatttcctaattagtggggtttctcaagaattttaatgca 179
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 667 ttttaagataaatgaattttcatttcctaattagtggggtttctcacgaattttaatgca 608

                                                                       
Query: 180 tacttatcaatttcaaacaaaaaggataaataacatttagacatatgtgtacacataaat 239
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 607 tacttatcaatttcaaacaaaaaggataaataacatttagacatatgtatacacataaat 548

                                                                       
Query: 240 atcacacatatcttatgtatatttttaaa---aagtacatttgaatactgagagaactag 296
           |||||||||||| ||||||||   |||||   ||||||||||||||||||||||||||||
Sbjct: 547 atcacacatatcatatgtata---ttaaaatgaagtacatttgaatactgagagaactag 491

                                                                       
Query: 297 ttcctcaaataatgtttccaaacttgcccaaagatctaaatgatgcaatactcttattaa 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttcctcaaataatgtttccaaacttgcccaaagatctaaatgatgcaatactcttattaa 431

                                                                       
Query: 357 cagtacagagaagggacttaagagatgactcagcatagtaattgtcctgcaaacatgaag 416
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 cagtacagagaagggacttaagagatgactcagcatagtaattgtcctgcaaacatgaag 371

                                                                       
Query: 417 aacttgagtttgtatcccaacacccagataaaagcta-ggcatgtacccctataatccca 475
           ||||||||||||||| ||||||||||||||||||| | ||||||||||||||||||||||
Sbjct: 370 aacttgagtttgtattccaacacccagataaaagc-acggcatgtacccctataatccca 312

                                                                       
Query: 476 ctactggggtgagcagacaaaagtgtattccaggggctttctgatgaggtattctagttg 535
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 ctactggggtgagcagacaaaagtgtattccaggggctttctgatgaggtattctagttg 252

                                                              
Query: 536 atctagccaatttggtttctgtaagagaacctgactcttgtgtgtgagagt 586
           |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 atctagccaatttggtttctgtaagagaacctgactcttgtgtgtgagagt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 987
Length adjustment: 10
Effective length of query: 576
Effective length of database: 977
Effective search space:   562752
Effective search space used:   562752
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)