CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGGATCCGCGGAA
TTCAACGAGAACCCTTCCACTCAGANAAAGTCTGTTACAGCCCCTTGAAT
TGACTCAAACAAATGTTTATAATTCTCTTGGTTCCATGCTGTTCCGGCTC
AAATGAAGATGTTGAGGACGAGGAGGAGCTCTTTTTACTAAGGATTCACA
GTGCCAGAGACAGGATGTGATACCAGGGTATCTGTCTACAGAATGTGTCC
CTTTCTCTGTTGTGTCATATTTCTTTGAAATACTTGTCTAAAAACGACAC
AAACCTCAAAGGCAACATTTTGTGCGATGGTGTGATGAGCATGTCCTTGC
AGGTGAATTAGCTGGGGCAACTTCTATCAGAGGTCATGTGGTTGTACCCA
CTCATAATTTTTCATCCCTTTTGGTGATTGGAATGTACCCCTCAATATTT
GGTGTTCATGTGAGTAGTGGGTAAGAGAAGTTAGAGGTTTAAATTCTCAG
TGTTTCTCCATTTCCATCCTAACCTGAGCTAACCACTGCCCTCTTTTATG
GCCTAGGCCTCTAGTGTACTTGACCTTGTCTATCTGCAAGGAGAGAAGCC
CGCTCATCATCATTCAACATGTAAGGGTTTGAAGAGTCTCTGGACGGTGC
CTATGGGGTAAACACCGCTGTTCCTTCTAAGTTGGAAATGGAAAACTGTC
CTTTGTTTTGCATTGGCCTTGGTTGTCCCTATTAAGTGTGTTCCTCCCTC
CAGGCTCTTGTTTTTTTCGCGCACT

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXAGGGCTCATAAAGCCCCACTTTGCTT
TGAAGACGTATAGTTAATGGTTGCAGGAAGAGATGGAGACATTTTCTTCA
ATAGTATGGTAAGTTGTCTATGATTTTCAAATAGCCTCTCACCCATTCAT
GAAACATTAAATCACTGAGTCACTGAGTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACA
CACATACACAAATAAAGTGAAAAGAAAATCATTAAAACGAATTGGAGGAA
GAAGAACTATATAGTATGAGGGAAGAGATTGCAGGAGCAGAATAAGAAAC
AGGGTATAAATATGATTCAAATGCATTCTATATACATATGAAAATATTAT
AATAAAATAATTATTACATATAATTAATATGTGCTGAGCAAAATAAGAGA
AGTGTACATAGGGATGGGAATCGATCTGATAATATTCACTTATACTACAC
CTTGTTCATAAAGGCTCCCTTAAAAACTCTCCAAGGGAGTCTCTCTCCCC
CGTTTGCAGCTTTGTTTTGGGAGCATGGGAAAAGAACTGGCGCCTTGATG
GAAAAAAAAGGGTTATGGGATCTTGGGTTGGTTCTGGTGATTTTTACCCC
CAGGTATGGGTTCATGTCTTTGGTTACGTTGAACTGGAGGAGTATTCCCC
CCTTTTTCCCACATATAAGGGATTCATTN

Query= MSMg01no421_l03.g1 MSMg01no421_l03.g1 CHROMAT_FILE:
MSMg01no421_l03.g1 PHD_FILE: MSMg01no421_l03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:41:58 2005
         (443 letters)



>mm_chr1_25715457_25716299
          Length = 843

 Score =  745 bits (385), Expect = 0.0
 Identities = 420/443 (94%), Gaps = 18/443 (4%)
 Strand = Plus / Plus

                                                                       
Query: 1   agggctcataaagccccactttgctttgaagacgtatagttaatggttgcaggaagagat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 219 agggctcataaagccccactttgctttgaagacgtatagttaatggttgcaggaagagat 278

                                                                       
Query: 61  ggagacattttcttcaatagtatggtaagttgtctatgattttcaaatagcctctcaccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 ggagacattttcttcaatagtatggtaagttgtctatgattttcaaatagcctctcaccc 338

                                                                       
Query: 121 attcatgaaacattaaatcactgagtcactgagtctctctctctctctctctctctctct 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 attcatgaaacattaaatcactgagtcactgagtctctctctctctctctctctctctct 398

                                                                       
Query: 181 ctctctctctctctctctctctctctctctctctctcacacacacacacatacacaaata 240
           ||||||||||| | | | |                  |||||||||||||||||||||||
Sbjct: 399 ctctctctctcacacacac------------------acacacacacacatacacaaata 440

                                                                       
Query: 241 aagtgaaaagaaaatcattaaaacgaattggaggaagaagaactatatagtatgagggaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aagtgaaaagaaaatcattaaaacgaattggaggaagaagaactatatagtatgagggaa 500

                                                                       
Query: 301 gagattgcaggagcagaataagaaacagggtataaatatgattcaaatgcattctatata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gagattgcaggagcagaataagaaacagggtataaatatgattcaaatgcattctatata 560

                                                                       
Query: 361 catatgaaaatattataataaaataattattacatataattaatatgtgctgagcaaaat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 561 catatgaaaatattataataaaataattattacatataattaatatgtgctaagcaaaat 620

                                  
Query: 421 aagagaagtgtacatagggatgg 443
           |||||||||||||||||||||||
Sbjct: 621 aagagaagtgtacatagggatgg 643


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 82
Number of extensions: 25
Number of successful extensions: 25
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space:   360689
Effective search space used:   360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)