Query= MSMg01no421_p10.b1 MSMg01no421_p10.b1 CHROMAT_FILE:
MSMg01no421_p10.b1 PHD_FILE: MSMg01no421_p10.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:18 2005
(527 letters)
>mm_chr1_169212549_169213474
Length = 926
Score = 888 bits (459), Expect = 0.0
Identities = 471/475 (99%), Gaps = 1/475 (0%)
Strand = Plus / Minus
Query: 53 agtccagtcagccctcttagtgaggaagagacttttttttttgttgttgttgttggtttt 112
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 926 agtccagtcagccctcttagtgaggaagagactttttttgttgttgttgttgttggtttt 867
Query: 113 tggtttttcgagacggtttctctgtagccccggctgtcctggaactcactctgtagacca 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 866 tggtttttcgagacggtttctctgtagccccggctgtcctggaactcactctgtagacca 807
Query: 173 ggctggcctcgaattcagaaatccgtctgcctctgcctcccaagtgctgggatcaaaggc 232
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 806 ggctggcctcgaattcagaaatccgtctgcctctgcctcccaagtgctgggatcaaaggc 747
Query: 233 gggtgccaccactgcctggcagcccggcaggaagagactttaatcttgtatgatgagtgg 292
||||||||||||||||||||||||||||||||||||||||||| |||| | |||||||||
Sbjct: 746 gggtgccaccactgcctggcagcccggcaggaagagactttaaacttg-aagatgagtgg 688
Query: 293 aacatttagaaacataatgaccttggtagtcacttaaataattcagtcaccagaggcaca 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 aacatttagaaacataatgaccttggtagtcacttaaataattcagtcaccagaggcaca 628
Query: 353 gataaacattctgtattatcttattctactgtatttgcagttgatttttaaggatgggtc 412
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 gataaacattctgtattatcttattctactgtatttgcagttgatttttaaggatgggtc 568
Query: 413 gctcagatagctggaatggcagggccagttagccactgtgggtgtagccaggtctctgcc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gctcagatagctggaatggcagggccagttagccactgtgggtgtagccaggtctctgcc 508
Query: 473 gacctgcttgttatccaggaggaagaagagggaaaccctaatgaaagaagggtct 527
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 gacctgcttgttatccaggaggaagaagagggaaaccctaatgaaagaagggtct 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 527
Length of database: 926
Length adjustment: 10
Effective length of query: 517
Effective length of database: 916
Effective search space: 473572
Effective search space used: 473572
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no421_p10.g1 MSMg01no421_p10.g1 CHROMAT_FILE:
MSMg01no421_p10.g1 PHD_FILE: MSMg01no421_p10.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:18 2005
(250 letters)
>mm_chr1_169067087_169067738
Length = 652
Score = 453 bits (234), Expect = e-132
Identities = 247/252 (98%), Gaps = 2/252 (0%)
Strand = Plus / Plus
Query: 1 tccagaactcagaatgcaaacagtctctgctagagaggattattgacagtgatcactgtg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tccagaactcagaatgcaaacagtctctgctagagaggattattgacagtgatcactgtg 260
Query: 61 ataatttttctccaggccaagatttttctga--aaaaaataattggagaaataagcccag 118
|||||||||||||||||||||||| |||||| |||||| ||||||||||||||||||||
Sbjct: 261 ataatttttctccaggccaagattcttctgaagaaaaaaaaattggagaaataagcccag 320
Query: 119 aacatataaaatggtttttggaaaggaaacaaaagttttattcccagagatgagaaacaa 178
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aacatataaaatggttttttgaaaggaaacaaaagttttattcccagagatgagaaacaa 380
Query: 179 agttgacgctggctaccatttctcaacacacagatcagggcccatctttagacctgacca 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttgacgctggctaccatttctcaacacacagatcagggcccatctttagacctgacca 440
Query: 239 tccttataagga 250
||||||||||||
Sbjct: 441 tccttataagga 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 652
Length adjustment: 9
Effective length of query: 241
Effective length of database: 643
Effective search space: 154963
Effective search space used: 154963
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
