Query= MSMg01no422_b08.b1 MSMg01no422_b08.b1 CHROMAT_FILE:
MSMg01no422_b08.b1 PHD_FILE: MSMg01no422_b08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:27 2005
(513 letters)
>mm_chr14_25071736_25072648
Length = 913
Score = 764 bits (395), Expect = 0.0
Identities = 425/435 (97%)
Strand = Plus / Minus
Query: 4 ggaattcttgtctgtatatctgagcaattaacatgggtcctctatccttcccttgttcac 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ggaattcttgtctgtatatctgagcaattaacatgggtcctctatccttcccttgttcac 376
Query: 64 ccttccagcaaaaagcccagagccctgctacacatgaggccagggttggggacaaaggcc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ccttccagcaaaaagcccagagccctgctacacatgaggccagggttggggacaaaggcc 316
Query: 124 aacacatcagtgtttaaaaagatgaaaaagtaatagtcagttcaaaagggaagctgacac 183
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 315 aacacatcagtgtttaaaaagatgagaaagtaatagtcagttcaaaagggaagctgacac 256
Query: 184 agttccctcctttgaagtttataacaataagaacctcaaaaggaagtgctggctttaatc 243
|||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 255 agtttcctccattgaagtttataacaatgagaacctcaaaaggaagtgctggctttaatc 196
Query: 244 ccagccttctggatgctgaggcaggctgatctctatgaattcaagaccgtgctggttaca 303
||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct: 195 ccagccttctggatgctgaggcaggctgatctctatgaatttaagactgtgctggttaca 136
Query: 304 ggacagaagggctgttacacagagaaaccctgtctcaaaaaagaaaaccacaaccacaac 363
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 135 ggacagaagggctgttacacagagaaaccctgtctcaaaaaagaaaaccacaaccacagc 76
Query: 364 aaaaggagcgaaaacaaacgtcttcaaagatagtagggaggggtttttggacctaagaat 423
||||||||||||||||||| ||||||||||||||||| |||| |||||||||||||||||
Sbjct: 75 aaaaggagcgaaaacaaacatcttcaaagatagtaggaagggttttttggacctaagaat 16
Query: 424 gacaggagttttctc 438
|||||||||||||||
Sbjct: 15 gacaggagttttctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no422_b08.g1 MSMg01no422_b08.g1 CHROMAT_FILE:
MSMg01no422_b08.g1 PHD_FILE: MSMg01no422_b08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:42:27 2005
(283 letters)
>mm_chr1_83221813_83222495
Length = 683
Score = 509 bits (263), Expect = e-148
Identities = 281/293 (95%), Gaps = 10/293 (3%)
Strand = Plus / Minus
Query: 1 actttttaaaggagcaaatatatctagtcatagagaccatggaagaactgcagtacagct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 362 actttttaaaggagcaaatatatctagtcatagagaccatggaagaactgcagtacagct 303
Query: 61 gagagcgcagggtggatagtatggaagcagtatacagaaaatagacagtgagcagatttt 120
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 302 gagagcgcagggtgaatagtatggaagcagtatacagaaaatagacagtgagcagatttt 243
Query: 121 acacacttggatgcaaaatgctatgcttttagccaggaatagctctgtctctgtcttttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 242 acacacttggatgcaaaatgctatgcttttagccaggaatagctctgtctctgtcttttc 183
Query: 181 tgtttctatctctgtttctgtctctgactctatctctatga----------tgtgtgtgt 230
||| ||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 182 tgtctctatctctgtttctgtctctgactctatctctatgatgtgtgtgtgtgtgtgtgt 123
Query: 231 gtgtgtgtgtgtgtgtgtgtctcctctctctctaactctccgtgtgtatgtac 283
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 gtgtgtgtgtgtgtgtgtgtctcctctctctctaactctccgtgtgtatgtac 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 7
Number of successful extensions: 6
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
