Query= MSMg01no424_f08.b1 MSMg01no424_f08.b1 CHROMAT_FILE:
MSMg01no424_f08.b1 PHD_FILE: MSMg01no424_f08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:16 2005
(507 letters)
>mm_chr1_108120372_108121282
Length = 911
Score = 656 bits (339), Expect = 0.0
Identities = 363/375 (96%), Gaps = 9/375 (2%)
Strand = Plus / Minus
Query: 139 ttgtaatgcagcaaggatatggaacccacctagctgtctgtcaagagatgaatggatact 198
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 911 ttgtaatgcagcaaggatatggaacccacctagctgtctgtcaagagatgaatggatact 852
Query: 199 gaaaacctgataaatgatataaaaatggaatactattctgctctagagaaaaatgaaatc 258
|||||||||||||||||||| |||||||||||||||||||||||| |||||||||| |||
Sbjct: 851 gaaaacctgataaatgatat-aaaatggaatactattctgctctaaagaaaaatgagatc 793
Query: 259 acaaaattgtaaagaaaaaggatagacatagaatatatagtattaagcaaaaccaccaat 318
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 792 acaaaattgtaaagaaaatggatagacatagaatatatagtattaagcaaaaccaccaat 733
Query: 319 gtcaggaagagagaaattgcaaggtattgcgcatatgtggagccttgcctatacaagcat 378
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 732 gtcaggaagagagaaattgcaaggtattgcgcatatgtggagccttgcctatacaagcat 673
Query: 379 acattcagagtcaaagtgtgtacatgtaggaagtaccacatgcagcagggaggataagaa 438
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 acattcagagtcaaagtgtgtacatgtaggaagtaccacatgcagcagggaggataagaa 613
Query: 439 agaacatatcag------gtgggggggggggggatgaagaacgtacaggacacacacgag 492
|||||||||||| ||||||||||||||||||||||||||||||| |||||||||
Sbjct: 612 agaacatatcaggtgtgtgtgggggggggggggatgaagaacgtacagg--acacacgag 555
Query: 493 ttctgaaggagaata 507
|||||||||||||||
Sbjct: 554 ttctgaaggagaata 540
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 911
Length adjustment: 10
Effective length of query: 497
Effective length of database: 901
Effective search space: 447797
Effective search space used: 447797
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_f08.g1 MSMg01no424_f08.g1 CHROMAT_FILE:
MSMg01no424_f08.g1 PHD_FILE: MSMg01no424_f08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:16 2005
(583 letters)
>mm_chr1_107975179_107976161
Length = 983
Score = 797 bits (412), Expect = 0.0
Identities = 445/456 (97%)
Strand = Plus / Plus
Query: 1 ttgttgtagggatttctcccttcatgagaacagctttgttggttggaaaccataacatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttgttgtagggatttctcccttcatgagaacagctttgttggttggaaaccataacatct 260
Query: 61 tagatctattttctttgtgtgcattttgtattgtcattggacaacacagtctgagatcaa 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 tagatctattttctttgcgtgcattttgtattgtcattggacaacacagtctgagataaa 320
Query: 121 aggcagagcaattgtttggtagagcaacaaactctgggttatctcctttattcacttttt 180
|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 321 aggcagagaaattgtttggtagagcaacaaactctgggttatctcctttattcactttct 380
Query: 181 ttttatgctccctggattctgcccacgtacctgcttagcgtagacccagtcactgactct 240
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atatatgctccctggattctgcccacgtacctgcttagcgtagacccagtcactgactct 440
Query: 241 gaatttgtcccacccaccagactcaccacactcacagtgataatctctttatgggatatt 300
||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gaaactgtcccacccaccagactcaccacactcacagtgataatctctttatgggatatt 500
Query: 301 atgtatgctaaccaactcagagtaacaagaccagactggggccaggagaaaccctgaaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgtatgctaaccaactcagagtaacaagaccagactggggccaggagaaaccctgaaag 560
Query: 361 aaaaaaataaatggtccttgcacgaatagctttctaggtaaaaatgaacactctctctta 420
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 561 aaaaaaataaatggtccttgcacgaatagctttctaggtaaaaatgagcactctctctta 620
Query: 421 catacacatatacagacacttgaggagttgtagttt 456
|||| ||||||||| |||||||||||||||||||||
Sbjct: 621 catatacatatacacacacttgaggagttgtagttt 656
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 983
Length adjustment: 10
Effective length of query: 573
Effective length of database: 973
Effective search space: 557529
Effective search space used: 557529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
