Query= MSMg01no424_l08.b1 MSMg01no424_l08.b1 CHROMAT_FILE:
MSMg01no424_l08.b1 PHD_FILE: MSMg01no424_l08.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:44 2005
(560 letters)
>mm_chr1_112740237_112741196
Length = 960
Score = 760 bits (393), Expect = 0.0
Identities = 410/417 (98%), Gaps = 3/417 (0%)
Strand = Plus / Minus
Query: 147 tatggaagtattttcatatttctacatacagactgtcagttagaccaacactatttatgt 206
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 960 tatggaagtattttcatatttctacatacagactgtcagttagaccaacactatttatat 901
Query: 207 aagatggttcctttttcccattgtatagttttgga---ttttttctcaaagatcaagtga 263
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 900 aagatggttcctttttcccattgtatagttttggatttttttttctcaaagatcaagtga 841
Query: 264 ctgtgggtatgtggtttatttctgggtcttcatttctgttctactattcaacctgtctgt 323
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 840 ctgtgggtatgtggttcatttctgggtcttcatttctgttctactattcaacctgtctgt 781
Query: 324 ctctgtgctaaaatcatgcatgtacacatatatatgacttgatagctagacaaagaagaa 383
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 ctctgtgctaatatcatgcatgtacacatatatatgacttgatagctagacaaagaagaa 721
Query: 384 atgaaagctttacaacatttgaaagtacaaataactaacgttgttagctggcactctagg 443
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 720 atgaaagctttacaacatttgaaagtacaaataactaaggttgttagctggcactctagg 661
Query: 444 cctgcatgctcttttccagattctacagtctgaaattgataccatatatattgtactgtt 503
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 cctgcatgctcttttccagattctacagtctgaaattgataccatatatattgtactgtt 601
Query: 504 agtctcccaagatgtcagttttgttttgtacagattcaatcactagatgataaccat 560
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 agtctcccaagatgtcagttttgttttgtacagattcaatcactagatgataaccat 544
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 560
Length of database: 960
Length adjustment: 10
Effective length of query: 550
Effective length of database: 950
Effective search space: 522500
Effective search space used: 522500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no424_l08.g1 MSMg01no424_l08.g1 CHROMAT_FILE:
MSMg01no424_l08.g1 PHD_FILE: MSMg01no424_l08.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:45:44 2005
(603 letters)
>mm_chr1_112552751_112553753
Length = 1003
Score = 1160 bits (600), Expect = 0.0
Identities = 602/603 (99%)
Strand = Plus / Plus
Query: 1 tttgattccctttgaacttaaggatggcatttaacctctgatatctgtgtgcccatttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgattccctttgaacttaaggatggcatttaacctctgatatctgtgtgcccatttta 260
Query: 61 accgcactttttgttatatatttgcttatttagttattcacacacacagatacacagaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 accgcactttttgttatatatttgcttatttagttattcacacacacagatacacagaca 320
Query: 121 cacacacacaaacatattcttaagcaaagaatgctacttatacacatacacacacatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cacacacacaaacatattcttaagcaaagaatgctacttatacacatacacacacatata 380
Query: 181 ttcttaagcaaagaatgctatttaagtgggaaattttataattattaaaattttgacaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttaagcaaagaatgctatttaagtgggaaattttataattattaaaattttgacaat 440
Query: 241 attcttttttgaatatacaaagtcttttaaataataatttctctgaatgctccattaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attcttttttgaatatacaaagtcttttaaataataatttctctgaatgctccattaaaa 500
Query: 301 atgaacctatgttgtgtttcctctaatactgcttttattcttgtgcttatggggtataca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atgaacctatgttgtgtttcctctaatactgcttttattcttgtgcttatggggtataca 560
Query: 361 atcatgcaataatgaacatatgcatatgtatcgaataatatattttctttttaatatcta 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 atcatgcaataatgaacatatgcatatgtatcgaataatatattttctttttaatatcta 620
Query: 421 tccctttctgaaatgcagaccaatgtagtagatgggcttggttctgtttgcatgttgata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tccctttctgaaatgcagaccaatgtagtagatgggcttggttctgtttgcatgttgata 680
Query: 481 ataattctgccttcctgtgaggggttgtggacatgtagtgagtcacactctgatgacttc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ataattctgccttcctgtgaggggttgtggacatgtagtgagtcacactctgatgacttc 740
Query: 541 ttgtgacgcaatcccctaatgaataaagaanacaatcactgggcaagtagacaggacttc 600
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 741 ttgtgacgcaatcccctaatgaataaagaaaacaatcactgggcaagtagacaggacttc 800
Query: 601 cgt 603
|||
Sbjct: 801 cgt 803
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 603
Length of database: 1003
Length adjustment: 10
Effective length of query: 593
Effective length of database: 993
Effective search space: 588849
Effective search space used: 588849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
