NTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCTGCACTATTCTATCTGGCCCTGGGCTTTTTTTGGTCGGTAGGTTT
TTAATGACTTCTTCTATTTCCTTGTGCAATATGGGCCTGTTTAGATAGTT
TACTTGCTCTTGATTTAAATTTGTTATGTGGTATCTCTCTAGAAAACCAT
CCATTTCATCTAGATTATCCAGTTTTTTTGAGCATAGATTTTTATAGTAG
GATCCAATAATTTTTTTGAATTTCCTCTATTTCTGTTGTTTCTGGTTTTG
TTAATTTGGATACTGCCTCTATGCCCTTTTGCTAGTTTGGCTAGGGCTTT
ATCTATCTTGTTGATTCTCTCAAAGAACCAGCTTCTGGTTTTGTTGATTT
TTTTTTTTTTGGTATTATTTTCTTTGTTTCTATTTGGTTGCTTTCAGCTC
TGAGTTTGACTATTTCCTGACTTCTACTCCTCTTGGATGAGTTTGCTTTC
TTGTTGTTGTTGTTCTAGAGCTCTCAGGTGTTCAGCTAAGTTGTTAGTGT
AAGTTCTTTCTTTACCAGGGCACTTAATGCTATGAACTTTCCTTTTAGTA
CTGCTCTCTTTGTGTCCCATAAGTTTGGGGAATGATGTGTCAACAATTTT
CATTAAATACTAAGAAGNCCTTTAATTTCTTTCCTTACTTTTTTCCCTGA
CCACGTTATTCTTGTAGTAAAGATGTTGTTCAGTTTTCTCATGTTATGGG
AAGCCTTTTGTAATCTTTG

NCATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXACTTAAAATAACTGCCCTTCAAGT
TCAACATGCATCAGCTAGGCTGGAGTAAGGAAAAGGAAAACAAAATATAT
CTGTGACTATTGAATCTGTTCCAGGAATTTATAGAAAATAAACTAGTATT
TCCTAACTAGTATCATAAAGAAATTTTAAATTTAACAGCATAAATGGTAC
AAAGGTGAAATTATCTTTGCAATTCATCTTCCATTTTATTCTTTTCCTGT
AATATTTATTTAACACCCTCATTTACTGTGTTAGGTTTCATGCCAAGAAA
GCATAACAGATGTGTTTCTTGTCCTTGAAAAGCTCAGATCCTAAAATAGG
TTTCTACAAAAACAAGAAAAAGTGTAACAGAGATGAAACACACAGAAAAT
TTATGACTCCTTCCAAGTTCCTTTACCATGGTGGGATAGCTAGTATCTGA
TATTGAAGAGGTCTGTGTCTCCAAGACAGAGCTCAGCATTGGGCAGCCTC
TCTGTCCTGCTTTCCTCCATGTGCCTCTTAGGAGTAGCCTTGGGTAGAAG
CAAATGTCCTCACTCTTTTCTCAGTTCTTTGTTCACACTTACCTCTTTCC
CATTTTCATCTTCCCACACATCCCCCTACTTTCTTTTTTTATTTACATAC
AGGGAAAGAACTCTAAAAATTTGATGTAGAGGCCATCCCCTATTTTCCTT
GCCTTTAAGGTCCCAAAA

Query= MSMg01no428_f22.g1 MSMg01no428_f22.g1 CHROMAT_FILE:
MSMg01no428_f22.g1 PHD_FILE: MSMg01no428_f22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:50:32 2005
         (496 letters)



>mm_chr1_47169162_47170057
          Length = 896

 Score =  944 bits (488), Expect = 0.0
 Identities = 494/496 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   acttaaaataactgcccttcaagttcaacatgcatcagctaggctggagtaaggaaaagg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 696 acttaaaataactgcccttcaagttcaacatgcatcagctaggctggagtaaggaaaagg 637

                                                                       
Query: 61  aaaacaaaatatatctgtgactattgaatctgttccaggaatttatagaaaataaactag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 636 aaaacaaaatatatctgtgactattgaatctgttccaggaatttatagaaaataaactag 577

                                                                       
Query: 121 tatttcctaactagtatcataaagaaattttaaatttaacagcataaatggtacaaaggt 180
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 576 tatttcctaactagtatcataaagaaattttaaatttgacagcataaatggtacaaaggt 517

                                                                       
Query: 181 gaaattatctttgcaattcatcttccattttattcttttcctgtaatatttatttaacac 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 516 gaaattatctttgcaattcatcttccattttattcttttcctgtaatatttatttaacac 457

                                                                       
Query: 241 cctcatttactgtgttaggtttcatgccaagaaagcataacagatgtgtttcttgtcctt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 456 cctcatttactgtgttaggtttcatgccaagaaagcataacagatgtgtttcttgtcctt 397

                                                                       
Query: 301 gaaaagctcagatcctaaaataggtttctacaaaaacaagaaaaagtgtaacagagatga 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 396 gaaaagctcagatcctaaaataggtttctacaaaaacaagaaaaagtgtaacagagatga 337

                                                                       
Query: 361 aacacacagaaaatttatgactccttccaagttcctttaccatggtgggatagctagtat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 336 aacacacagaaaatttatgactccttccaagttcctttaccatggtgggatagctagtat 277

                                                                       
Query: 421 ctgatattgaagaggtctgtgtctccaagacagagctcagcattgggcagcctctctgtc 480
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 276 ctgatatcgaagaggtctgtgtctccaagacagagctcagcattgggcagcctctctgtc 217

                           
Query: 481 ctgctttcctccatgt 496
           ||||||||||||||||
Sbjct: 216 ctgctttcctccatgt 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 496
Length of database: 896
Length adjustment: 10
Effective length of query: 486
Effective length of database: 886
Effective search space:   430596
Effective search space used:   430596
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)