Query= MSMg01no429_c03.b1 MSMg01no429_c03.b1 CHROMAT_FILE:
MSMg01no429_c03.b1 PHD_FILE: MSMg01no429_c03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:31 2005
(204 letters)
>mm_chr1_50346213_50346816
Length = 604
Score = 364 bits (188), Expect = e-105
Identities = 194/196 (98%)
Strand = Plus / Plus
Query: 5 gaattctgcattctgaataagccttcaatatggtctcttgaagaaagaagagggaaggga 64
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcattcagaataagccttcaatatggtctcttgaagaaagaagagggaaggga 264
Query: 65 gaacccattaacttcaacttgagcatccattggagagaggtcgttatcttactagaagca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gaacccattaacttcaacttgagcatccattggagagaggtcgttatcttactagaagca 324
Query: 125 atcggttctgaaccattcatagttaaccaaaagacaacactctggcttcagaagtttcta 184
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcggtcctgaaccattcatagttaaccaaaagacaacactctggcttcagaagtttcta 384
Query: 185 ccacaaccaattaaat 200
||||||||||||||||
Sbjct: 385 ccacaaccaattaaat 400
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 204
Length of database: 604
Length adjustment: 8
Effective length of query: 196
Effective length of database: 596
Effective search space: 116816
Effective search space used: 116816
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no429_c03.g1 MSMg01no429_c03.g1 CHROMAT_FILE:
MSMg01no429_c03.g1 PHD_FILE: MSMg01no429_c03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:51:31 2005
(634 letters)
>mm_chr1_50438277_50439313
Length = 1037
Score = 710 bits (367), Expect = 0.0
Identities = 391/401 (97%), Gaps = 5/401 (1%)
Strand = Plus / Minus
Query: 238 gtcatttatgtttattctaaatttctcacttgtgataacttgtactttgcagctctccct 297
|||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 837 gtcattcatgtttattctaaatttctcac-agtgataacttgtactttgcagctctccct 779
Query: 298 gctattgtgatgagaacacaaactgaatctcaaagaatttcaagactagattatcttcag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778 gctattgtgatgagaacacaaactgaatctcaaagaatttcaagactagattatcttcag 719
Query: 358 acctattttcttgcaaaatatttcctattgactcaaaattaccttgtatactgtttgaca 417
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 acctattttcttgcaatatatttcctattgactcaaaattaccttgtatactgtttgaca 659
Query: 418 tgttcaaaattaattttgtaaactcttttgaaacctgaagatatgtgtcatgaatctgtc 477
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tgttcaaaattaattttgtaaactcttttgaaacctgaagatatgtgtcatgaatctgtc 599
Query: 478 cattctacttcattctgatttttatgcatgttctgtacacacacacacataaaaatatgt 537
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 cattctacttcattctgatttttatgcatgttctgtacacacacacacataaaaatatgt 539
Query: 538 a----tatttgtatattaatataatggactactgtacctggttgaaatggatataagaat 593
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 538 atgagtatttgtatattaatataatggactactgtacctggttgaaatggatataagact 479
Query: 594 atcattttgatatttattatgttttttagcaattaaagact 634
||||||||||||||||||||||||||||| |||||||||||
Sbjct: 478 atcattttgatatttattatgttttttagtaattaaagact 438
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1037
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1027
Effective search space: 640848
Effective search space used: 640848
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
