Query= MSMg01no429_m17.b1 MSMg01no429_m17.b1 CHROMAT_FILE:
MSMg01no429_m17.b1 PHD_FILE: MSMg01no429_m17.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:23 2005
(437 letters)
>mm_chr1_79166246_79167082
Length = 837
Score = 787 bits (407), Expect = 0.0
Identities = 428/435 (98%), Gaps = 1/435 (0%)
Strand = Plus / Plus
Query: 4 ggaattccagaat-tattccctggattctttattgtgaaaattgtttttcttggaggtag 62
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 ggaattccagaaaatattccctggattctttattgtgaaaattgtttttcttggaggtag 262
Query: 63 aaggatagctcagaggttaagaatgattgctgctcttccaaagaacctaagtttgaatct 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaggatagctcagaggttaagaatgattgctgctcttccaaagaacctaagtttgaatct 322
Query: 123 cagtatcaacactgggcatctcacagacacctggaactccagcttcctgggacctgattc 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 323 cagtatcaacactgggcatctcacagacacctggaactccagcttcctgggacctgattc 382
Query: 183 catcttttggtcttcatagacatatgcacacttacagatgcgtacacataaataaaaata 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 383 catcttttggtcttcatagacatatgcacacttacagatgcgtacacataaataaaaata 442
Query: 243 aaataaacctttaacattgatttttagcttaattgtaaaatcagagtaattctagtcata 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 aaataaacctttaacattgatttttagcttaattgtaaaatcagagtaattctagtcata 502
Query: 303 ttggtcttttgatggatttttatttttctatttacttcattgtgaatgcaaagtatgaca 362
||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 ttggtctttcgatagatttttatttttctatttacttcattgtgaatgcaaagtatgaca 562
Query: 363 catagagaactgaattttgttgtactgttgttgtacttaatctgaagagggggagaactc 422
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||
Sbjct: 563 catagagaactgaattttgttgtactgttgttgtgcttaatctgaaaagggggataactc 622
Query: 423 caaagggaacaaaca 437
|||||||||||||||
Sbjct: 623 caaagggaacaaaca 637
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 437
Length of database: 837
Length adjustment: 9
Effective length of query: 428
Effective length of database: 828
Effective search space: 354384
Effective search space used: 354384
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_m17.g1 MSMg01no429_m17.g1 CHROMAT_FILE:
MSMg01no429_m17.g1 PHD_FILE: MSMg01no429_m17.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:23 2005
(532 letters)
>mm_chr1_79300090_79301021
Length = 932
Score = 847 bits (438), Expect = 0.0
Identities = 447/450 (99%)
Strand = Plus / Minus
Query: 83 ctctctgcctcctcccagctcctctatgtggtctgtctaaaatttgtctcacaccagcct 142
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 932 ctctctgcctcctcccagctcctctatgtggtctgtctaaaatttgtctcacaccagcct 873
Query: 143 ctgtgcgttcttccactagaggaccataaagttcacgctattggactcgccccacttgca 202
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 872 ctgtgcgttcttccactagaggaccataaagttcacgctattggacttgccccacttgca 813
Query: 203 tgttctgcacagaaattccacagggctgaagcatcaggcactgtgaaattatggagtttg 262
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 812 tgttctgcacagaaattccacagggctgaagcatcaggcacagtgaaattatggagtttg 753
Query: 263 tgcctgcttgctttaactccccaggaagcatgcttgagtaacatcctgcatatcaaccaa 322
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 752 tgcctgcttgctttaactccccaggaagcatgcttgagtaacatcctgcatatcaaccaa 693
Query: 323 ggacagggtctctaggtgactggaaaggtagcgtagtagctgggagagcttgcttggctt 382
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 692 ggacagagtctctaggtgactggaaaggtagcgtagtagctgggagagcttgcttggctt 633
Query: 383 gcaaagaactgaacttgacacctggttcacacaatttggacaaagaacaccaaacaactg 442
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 632 gcaaagaactgaacttgacacctggttcacacaatttggacaaagaacaccaaacaactg 573
Query: 443 ctgttagaaacagagcaacaggcaacacagggttgcatcccaagagaagggaactgggta 502
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 572 ctgttagaaacagagcaacaggcaacacagggttgcatcccaagagaagggaactgggta 513
Query: 503 tgtggtgagttttacaatcacatggctctc 532
||||||||||||||||||||||||||||||
Sbjct: 512 tgtggtgagttttacaatcacatggctctc 483
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 932
Length adjustment: 10
Effective length of query: 522
Effective length of database: 922
Effective search space: 481284
Effective search space used: 481284
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
