Query= MSMg01no429_n02.b1 MSMg01no429_n02.b1 CHROMAT_FILE:
MSMg01no429_n02.b1 PHD_FILE: MSMg01no429_n02.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:25 2005
(618 letters)
>mm_chr1_83679167_83680184
Length = 1018
Score = 1125 bits (582), Expect = 0.0
Identities = 597/602 (99%)
Strand = Plus / Plus
Query: 17 gaattcagccatgttgcaatctctggacacaacttctggctaaggagttccaagctcctt 76
||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 gaattcagccatggtgaaatctctggacacaacttctggctaaggagttccaagctcctt 276
Query: 77 gtaatctcttgagtaacaggtaatacaggataacccttttgtcaataatattcatcccta 136
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 gtaatctcttgagtaacaggtaatacaggataacccttttgtcaataatattcatcccta 336
Query: 137 gttgcaagtcatgtaacacaagttttaagaaatttgagctttctggagtcacgagggtga 196
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 337 gttgcaagtcatgtaacacaagttttaagaaatttgagctttctggagtcacgagggtga 396
Query: 197 ctacagccagggtccttagacagttattggaaggagccttatcatgagaagacttaggca 256
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 397 ctacagccagggcccttagacagttattggaaggagccttatcatgagaagacttaggca 456
Query: 257 caatctattaaagggtggaaactttgagctccatccctgatcttcagagagagaaaagtg 316
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 457 caatctattaaagggtggaaactttgagctccatccctgaccttcagagagagaaaagtg 516
Query: 317 actggagcctagagatagaatcactaagcaacacctagtgatgtgatcagtcctgcacat 376
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 517 actggagcctagagatagaatcactaagcaacacctagtgatgtgatcagtcctgcacat 576
Query: 377 gctaggaaactttaaggactaacagttggtttcagggatcttctttggtagtgaacgcat 436
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 577 gctaggaaactttaaggactaacagttggtttcagggatcttctttggtagtgaacgcat 636
Query: 437 caagttctgcagagtagctcactaacagagcatggaagccccatgctttatcacctatat 496
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 637 caagttctgcagagtagctcactaacagagcatggaagccccatgctttatcacctatat 696
Query: 497 gcacctatattgctatatatttcacctgtattgctctatatgtcgcttgcatttgattga 556
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 697 gcacctatattgctatatatttcacctgtattgctctatatgtcgcatgcatttgattga 756
Query: 557 atcagagtcgcaacctttataagaagcaaataattgtaagacccccatttctctgaattt 616
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 757 atcagagtcgcaacctttataagaagcaaataattgtaagacccccatttctctgaattt 816
Query: 617 tg 618
||
Sbjct: 817 tg 818
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1018
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1008
Effective search space: 612864
Effective search space used: 612864
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no429_n02.g1 MSMg01no429_n02.g1 CHROMAT_FILE:
MSMg01no429_n02.g1 PHD_FILE: MSMg01no429_n02.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:25 2005
(593 letters)
>mm_chr1_83861830_83862819
Length = 990
Score = 1106 bits (572), Expect = 0.0
Identities = 587/594 (98%), Gaps = 5/594 (0%)
Strand = Plus / Minus
Query: 1 atgaatactgaacactagtccctctttcacagataagaaaactgaggcatgataaagtta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 867 atgaatactgaacactagtccctctttcacagataagaaaactgaggcatgataaagtta 808
Query: 61 agaaacttgatgaaagtagtgaaattactataataaatgtgcaccaactaatactcatgt 120
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 807 agaaacttgatgaaagtagtgaaattactatactaaatgtgcaccaactaatactcatgt 748
Query: 121 tttaaaatatcacttgaatgcaaatgcatcttcatgtgacttacttatatcgctagtgtt 180
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 747 tttaaaatatcacttgaatgcaaatgcatcttcatgtg----acttatatcgctagtgtt 692
Query: 181 ttatttgagaattcataacaatgctcttggtagaccatccatagtactgactagacttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 ttatttgagaattcataacaatgctcttggtagaccatccatagtactgactagacttta 632
Query: 241 tctgtgtcagcttttacatttctgatggcctgcactttctaattacccagtgaaattcag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tctgtgtcagcttttacatttctgatggcctgcactttctaattacccagtgaaattcag 572
Query: 301 tgcaaggtgaataaccactcaatacagaataatatatgc-aaaaaaaccaaaaacaaaat 359
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 571 tgcaaggtgaataaccactcaatacagaataatatatgcaaaaaaaaccaaaaacaaaat 512
Query: 360 aaagatcagttctcccaaaagcttcaaaaatcaggatcttttggccaagatttttttaaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 aaagatcagttctcccaaaagcttcaaaaatcaggatcttttggccaagatttttttaaa 452
Query: 420 gtagtaaaattctagcttgtactttatctgaagggtctgtgctcaaaagagcagccactt 479
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 gtagtaaagttctagcttgtactttatctgaagggtctgtgctcaaaagagcagccactt 392
Query: 480 tcaactatatagtacaaggtcatccaggaatagaactgatgaccgcttgggtcattttta 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 tcaactatatagtacaaggtcatccaggaatagaactgatgaccgcttgggtcattttta 332
Query: 540 tgacataatgtcctagttaattctttggtcaacttaactaacaagctggaatca 593
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 tgacataatgtcctagttaattctttggtcaacttaactaacaagctggaatca 278
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 593
Length of database: 990
Length adjustment: 10
Effective length of query: 583
Effective length of database: 980
Effective search space: 571340
Effective search space used: 571340
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
