Query= MSMg01no430_c19.b1 MSMg01no430_c19.b1 CHROMAT_FILE:
MSMg01no430_c19.b1 PHD_FILE: MSMg01no430_c19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:54 2005
(456 letters)
>mm_chr1_178406538_178407392
Length = 855
Score = 808 bits (418), Expect = 0.0
Identities = 445/454 (98%), Gaps = 1/454 (0%)
Strand = Plus / Minus
Query: 3 catatcccctctaactggagttacagacagttgtgaaccaccatgtgggtgctaggaata 62
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 777 catatcccctctaactggagttacagacagttgtgaaccaccatgggggtgctaggaata 718
Query: 63 gaaactgggtcctctgcaagaacaaaaagtgctcttaacctctgagccatctgtccagcc 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717 gaaactgggtcctctgcaagaacaaaaagtgctcttaacctctgagccatctgtccagcc 658
Query: 123 ccactatcaagtacattttctgcacttacctaccacccaaaccaaacactccatgacaga 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657 ccactatcaagtacattttctgcacttacctaccacccaaaccaaacactccatgacaga 598
Query: 183 attagaactagaaaaccttatcttcctatcaccattcaagtttgtgaccatcacctgttt 242
||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||| |
Sbjct: 597 attagaactagaaaaccttctcttcctatcaccattcaagtttgtgaccatcgcctgtgt 538
Query: 243 ttagtccttcctcacctccttacatttaatctttcttgttctcatgtcattccaaaccca 302
|||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 537 ttagtccttcctcacctccttatatttaacctttcttgttctcatgtcattccaaaccca 478
Query: 303 tatgtacatttctttacatgtgcacatgtgtcactggctggattttatatatgagagaga 362
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 catgtacatttctttacatgtgcacatgtgtcactggctggattttatatatgagagaga 418
Query: 363 acatagacactatccaactctcacaccccaaattgttcatttcattagagatttgttaat 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 acatagacactatccaactctcacaccccaaattgttcatttcattagagatttgttaat 358
Query: 423 tttatcagttttttttcaatatttttctttgtat 456
|||||||| ||||||||||| |||||||||||||
Sbjct: 357 tttatcag-tttttttcaatgtttttctttgtat 325
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 855
Length adjustment: 10
Effective length of query: 446
Effective length of database: 845
Effective search space: 376870
Effective search space used: 376870
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no430_c19.g1 MSMg01no430_c19.g1 CHROMAT_FILE:
MSMg01no430_c19.g1 PHD_FILE: MSMg01no430_c19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:52:54 2005
(387 letters)
>mm_chr1_178360775_178361560
Length = 786
Score = 679 bits (351), Expect = 0.0
Identities = 372/383 (97%), Gaps = 8/383 (2%)
Strand = Plus / Plus
Query: 1 caatatagagtcatctactttttaaaatatatagtcaaattttctaaaacttgacccttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caatatagagtcatctactttttaaaatatatagtcaaattttctaaaacttgacccttt 260
Query: 61 gataaaaaatctggtataaatgcatagtgaattaaatacattaatcaaccatccattttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gataaaaaatctggtataaatgcatagtgaattaaatacattaatcaaccatccattttt 320
Query: 121 tatttcacttcactcaataaagtatgtatggtccatagtaaaactcaaagtcagcaaatg 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ta-ttcacttcactcaataaagtatgtatggtccatagtaaaactcaaagtcagcaaatg 379
Query: 181 cctatatttccggtaattcccccatagagccatcatgtgtctatgaagtgtttgcatgtc 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 380 cctatatttccggtaattcccccatagagccatcatgtgtctatgaaatgtttgcatgtc 439
Query: 241 cccaaagcatatgattaacctgaaaatttcctgtctcaaattttaacctactctgagacc 300
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 440 cccaaagcatatgattaacctgaaaattccctgtctcaaattttaacctactctgagacc 499
Query: 301 agattcatcagcacatatatgacataaagtgaagtgattcttgattcttcctccaagaat 360
|||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 500 agattcatcagcacatatatgacataaagtgaggtgattctt-------cctccaagaat 552
Query: 361 gggctcttttttttttttttttt 383
|||||||||||||||||||||||
Sbjct: 553 gggctcttttttttttttttttt 575
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 786
Length adjustment: 9
Effective length of query: 378
Effective length of database: 777
Effective search space: 293706
Effective search space used: 293706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
