Query= MSMg01no431_d19.b1 MSMg01no431_d19.b1 CHROMAT_FILE:
MSMg01no431_d19.b1 PHD_FILE: MSMg01no431_d19.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:27 2005
(512 letters)
>mm_chr1_185549987_185550897
Length = 911
Score = 920 bits (476), Expect = 0.0
Identities = 500/508 (98%), Gaps = 1/508 (0%)
Strand = Plus / Plus
Query: 5 gaattctttacttattatcgggttgaggttgaagtttgatcaaagaggagtcttggtcag 64
||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctttacttataat-gggttgaggttgaagtttgatcaaagaggagtcttggtcag 263
Query: 65 tagtcagtctgcatttgaggccaaatgaggagacacatttggcatgggggtagggaggct 124
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 264 tagtcagtctgcatttgaggccaaatgaggagacacatttggcataggggtagggaggct 323
Query: 125 gcggagaattttaattctgtgcctatcttaaacctggtttgagttgtggaacctgaaaga 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gtggagaattttaattctgtgcctatcttaaacctggtttgagttgtggaacctgaaaga 383
Query: 185 caaacattcataaataaacatgggtttgcagtttaactagaaccaggctgtcctggttag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caaacattcataaataaacatgggtttgcagtttaactagaaccaggctgtcctggttag 443
Query: 245 ttttcactgttaatttaacacaatgtagagatcctggtatgaggagacatcagttgaaga 304
||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||
Sbjct: 444 ttttcactgttaatttaacacaatgtagagatcctgggaagaggagacatcagttgaaga 503
Query: 305 aacaccttgattagattggctagtgatcttgtctatgagaaattgttttgattgatggtt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 aacaccttgattagattggctagtgatcttgtctatgagaaattgttttgattgatggtt 563
Query: 365 ggtgtgggaggactcagtctgctgttgggtagtaccattctcaggcagatgggcctggga 424
| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gatgtgggagggctcagtctgctgttgggtagtaccattctcaggcagatgggcctggga 623
Query: 425 ggtataaccaagctaagtgagcaacaggcagcccttcttcatggtttctgcttcagttcc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ggtataaccaagctaagtgagcaacaggcagcccttcttcatggtttctgcttcagttcc 683
Query: 485 tgccatgcattctctccacaatggactg 512
||||||||||||||||||||||||||||
Sbjct: 684 tgccatgcattctctccacaatggactg 711
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 512
Length of database: 911
Length adjustment: 10
Effective length of query: 502
Effective length of database: 901
Effective search space: 452302
Effective search space used: 452302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no431_d19.g1 MSMg01no431_d19.g1 CHROMAT_FILE:
MSMg01no431_d19.g1 PHD_FILE: MSMg01no431_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:54:27 2005
(250 letters)
>mm_chr1_185615292_185615941
Length = 650
Score = 476 bits (246), Expect = e-139
Identities = 249/250 (99%)
Strand = Plus / Minus
Query: 1 atatgaacaatagctgtgtcatatctagaagatagaactttatgcctctcttccctagtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atatgaacaatagctgtgtcatatctagaagatagaactttatgcctctcttccctagtt 391
Query: 61 ggatcttatattctttcccttgcaggggttgggggtgaaggtgacacagatgtcccatct 120
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 390 ggatcttatattctttcccttgcaggggttgggggtgagggtgacacagatgtcccatct 331
Query: 121 atggctgaggactgaaaacctccttgcagcattgcaactctgtacttggttgcttaaatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atggctgaggactgaaaacctccttgcagcattgcaactctgtacttggttgcttaaatg 271
Query: 181 aatgtggagcttgagaaaaagacaacagttactcctgaaagaataaaaaacaaaacttaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 aatgtggagcttgagaaaaagacaacagttactcctgaaagaataaaaaacaaaacttaa 211
Query: 241 ttaaaaatca 250
||||||||||
Sbjct: 210 ttaaaaatca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
