Query= MSMg01no432_b14.b1 MSMg01no432_b14.b1 CHROMAT_FILE:
MSMg01no432_b14.b1 PHD_FILE: MSMg01no432_b14.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(402 letters)
>mm_chr1_76255864_76256665
Length = 802
Score = 694 bits (359), Expect = 0.0
Identities = 386/395 (97%), Gaps = 1/395 (0%)
Strand = Plus / Plus
Query: 5 gaattcaaattcaataacttctttgaacgtgtcttgtctgattggacattcacggtttat 64
|||||||||||||| ||||||||||||||||||||||||||||||||||| | |||||||
Sbjct: 205 gaattcaaattcaacaacttctttgaacgtgtcttgtctgattggacattgatggtttat 264
Query: 65 taggcatgttgtctgtttgtggtgtactgattaaaaaatgtatccttatgcctctccccc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 taggcatgttgtctgtttgtggtgtactgattaaaaaatgtatccttatgcctctccccc 324
Query: 125 cttcccttcctcccatccccttctctgccctccctcccccaccagttccataccctactt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 cttcccttcctcccatccccttctctgccctccctcccccaccagttccataccctactt 384
Query: 185 tgtttcttcccttccttctttgtttttactgggattgggggtggggagggtacactgagg 244
||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||
Sbjct: 385 tgtttcttcccttccttctttgtttttactggggt-gggggtggggagggtacactgagg 443
Query: 245 atgaaaccttgggtcttataagagccaggcaggcattctgctgtgggtatacacctgcat 304
||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 atggaaccttgggccttataagagccaggcaggcattctgctgtgggtatacacctgcat 503
Query: 305 cccttttaaactttgagataaggccttgctaaattgctcatgcagcttcaaagcttgtgt 364
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 cccttttaaactttgagataaggccttgctaaattgctcatgcagcttcaaagcttgtga 563
Query: 365 ctgtttggcttccaagtagttagcattacagataa 399
||||| |||||||||||||||||||||||||||||
Sbjct: 564 ctgttcggcttccaagtagttagcattacagataa 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 802
Length adjustment: 9
Effective length of query: 393
Effective length of database: 793
Effective search space: 311649
Effective search space used: 311649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_b14.g1 MSMg01no432_b14.g1 CHROMAT_FILE:
MSMg01no432_b14.g1 PHD_FILE: MSMg01no432_b14.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:41 2005
(513 letters)
>mm_chr1_76401440_76402352
Length = 913
Score = 969 bits (501), Expect = 0.0
Identities = 510/513 (99%)
Strand = Plus / Minus
Query: 1 agtctcttcctctcccttcacattgttatcaggtgggctatcacaagggatatcacaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 agtctcttcctctcccttcacattgttatcaggtgggctatcacaagggatatcacaaga 654
Query: 61 ggcggctctaagtacccagacctgccttccagatctccaggtctctctgctttcccatcc 120
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 ggcggctctaagtacacagacctgccttccagatctccaggtctctctgctttcccatcc 594
Query: 121 tcttttctcttgtatgggctaaaatccaacctcatagcaaggaatagtccccaaagagtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tcttttctcttgtatgggctaaaatccaacctcatagcaaggaatagtccccaaagagtt 534
Query: 181 tgagcttgaaaggcaacactttcatcattggttcatttgacaagtactaaatgcctactt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 tgagcttgaaaggcaacactttcatcattggttcatttgacaagtactaaatgcctactt 474
Query: 241 gcttcctggcccagttccactggctctacagtgatgaaagacaaagaagagaccttgctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 gcttcctggcccagttccactggctctacagtgatgaaagacaaagaagagaccttgctt 414
Query: 301 cctaagaccctgtactcaagtaggaacttggataagcattggatgctgagtgcagagggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 cctaagaccctgtactcaagtaggaacttggataagcattggatgctgagtgcagagggc 354
Query: 361 tgggaaaagagtagagacctaccagaaactagacaggcagttaagattgggtttctacgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 tgggaaaagagtagagacctaccagaaactagacaggcagttaagattgggtttctacgg 294
Query: 421 ccaggctttgtgactctgcccccatcagtcatgagccatgtgacatgatctgagctactt 480
||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 293 ccaggctttgtgactctgcccccatcagtcatgagccatgtgatatggtctgagctactt 234
Query: 481 gactaagtcacattgtgttttatcctcctcatc 513
|||||||||||||||||||||||||||||||||
Sbjct: 233 gactaagtcacattgtgttttatcctcctcatc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 513
Length of database: 913
Length adjustment: 10
Effective length of query: 503
Effective length of database: 903
Effective search space: 454209
Effective search space used: 454209
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
