Query= MSMg01no432_c06.b1 MSMg01no432_c06.b1 CHROMAT_FILE:
MSMg01no432_c06.b1 PHD_FILE: MSMg01no432_c06.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:45 2005
(455 letters)
>mm_chr1_91594972_91595826
Length = 855
Score = 781 bits (404), Expect = 0.0
Identities = 440/452 (97%), Gaps = 2/452 (0%)
Strand = Plus / Minus
Query: 5 gaattcttcttgttttatccaatgacaccgattaaattactctggctaaaacagttttac 64
||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 gaattcttcttgtttgataaaatgacaccgattaaattactctggctaaaacagttttac 596
Query: 65 gataaacttgattcattttaaccctgtcatatcttttcaaagatgtaattttctatacaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gataaacttgattcattttaaccctgtcatatcttttcaaagatgtaattttctatacaa 536
Query: 125 aatgaacttggggctaaataatttatgaagtgcttcccattacttacgagtccaacagag 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aatgaacttggggctaaataatttatgaagtgcttcccattacttacgagtccaacagag 476
Query: 185 agtgtgtacactgcaccagcatcattctcattgggagccatttttctttgggacccaaac 244
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 475 agtgtgtacactgcaccagcatcattctcactgggagccatttttctttgggacccaaac 416
Query: 245 tgaaagcgagggctgtgcaaaggcaggagccttctgcgttttatg-atggcacggaggga 303
||||||||||||||||||||||||||||||||||||||||||| | || |||||||| ||
Sbjct: 415 tgaaagcgagggctgtgcaaaggcaggagccttctgcgttttaggaat-gcacggagaga 357
Query: 304 gagacgagccatgctccacacagacacccacctacaggcatttgaagacccactttcttt 363
||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||||
Sbjct: 356 cagacgagccatgctccacacagacacccatctacaggcatttgaagacctactttcttt 297
Query: 364 cctaaagcaagttctttccccaacaccacacctttctttccccttccattcacagcctgt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 cctaaagcaagttctttccccaacaccacacctttctttccccttccattcacagcctgt 237
Query: 424 cagtctgctccacctttaaacttcgactcaaa 455
|||||||||||||||||||||||| |||||||
Sbjct: 236 cagtctgctccacctttaaacttctactcaaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_c06.g1 MSMg01no432_c06.g1 CHROMAT_FILE:
MSMg01no432_c06.g1 PHD_FILE: MSMg01no432_c06.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:45 2005
(250 letters)
>mm_chr1_91440766_91441415
Length = 650
Score = 468 bits (242), Expect = e-136
Identities = 248/250 (99%)
Strand = Plus / Plus
Query: 1 tttccttaaaaaagagcctccctgagtgctcgtatgtttttggggtagacatcaaaggca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccttaaaaaagagcctccctgagtgctcgtatgtttttggggtagacatcaaaggca 260
Query: 61 gtatataaaaagacttttgctttgacagtatccaaatgattgaataatttttggctctca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtatataaaaagacttttgctttgacagtatccaaatgattgaataatttttggctctca 320
Query: 121 caaacactgtaagcaaaattaaagggcaaacttgaagtatttacagcatatgactaggaa 180
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caaatactgtaagcaaaattaaagggcaaacttgaagtatttacagcatatgactaggaa 380
Query: 181 tggtctttcatatgtaaacagtttttacaaaacaatgacaaaaattccacaacaaaaaaa 240
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 381 tggtctttcatatgtaaacagtttttacaaaacaatgagaaaaattccacaacaaaaaaa 440
Query: 241 aatggtcata 250
||||||||||
Sbjct: 441 aatggtcata 450
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 250
Length of database: 650
Length adjustment: 9
Effective length of query: 241
Effective length of database: 641
Effective search space: 154481
Effective search space used: 154481
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
