CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTATCAATGAGACATTTTCTATTTATGAATTAAATATGTTATAGATA
TTTAATATTTAATAAGATAAGTAAATATTTAATGGGTCCTTTAAAGCAAT
GAAGCATTACCATTATTCTAGAAACTATCTTCATATTTTAATTATTTAAA
AATACATCTTTGTTCATGCACATCTTAATAAAATTTTTGTGTTTTCAAAG
TGACAATCAACACAAAGACCAGTAGTGAAGTAAATATTCTAAGGGTAATT
GAATCTTGAAAGCTTTAAACATTATGATTTGATATCTCCCGTTGAAAACT
GAGGCTATTGTAATTTCAGTGACCTGAGTCAGCTCAGTTTGATATCAGAA
CATTAACATATATTAGCTAAGGAGTGAACATCATATTGCTCCTCTTATTA
AAATATGCTTATATCTCCATTAAAATAAAAAGCATTAGAAAACAAAAAAG
CAAAACTTACAAAAAACTATACCTAATATAAATATGCCGAANATAAACAG
TGAATATCAATTTACAAGTGAATACATATGTTATTTGACTGTCTGGATCT
GGTTTGCCCCACTCAAAATGATTTTTTTCCAGATGAAAGGAAGTTTTTTA
CAGCTGGAGATAACTCTACTGGAATAAACTGGGGTTTCCTTATTCATTGG
TCGGTGGGAAATTAAGGTGGTTTCCCAATTTGGCTATTTAAAAAAAAGCT
CCCGGGGACCAACTTTAAAAAAGGGCCCTTTGGTTAAG

AATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAATTCTGTGCCCAGTTTTCA
TAAGGTTATTAGATTCTCTGGAGTCTACCTTCTTGAGTTCTTTGTATATA
TTTTATATTTGCCCTCTATTGGATGTCTGTTGATTGCTGTTTTGTCCTGA
CAGTATCCTTTGACTTACTGAAGCTTTGCAATTTTATGATGTTCAAAAGT
TACAAAACTAATGAGTTATGAACCAAATGGATTTAAAAGATATCTATAGA
ACATTTCATTCCAAAACAAAAGAATATACCTCCTTTTCAGCATCTCATTG
TACTTCTCCAAAATTGACCATATAATTGGTCACAAAACGGCATCAACCGA
TACAAGAAGATTGAAATAATCCCATGCATCCTATCAGATAACCACGGAAT
TAAGTTGTTCTTCAATAACAACAAAAACAATGGAAAACCAACATACATGG
AAGCTGAACAATGTTCTTCTCAATGAAGACTTGATCAAGAAAGAAATCAA
AGACTTTTTAGAATTTAATGAAAATGAAGGCACACCATACCAAAACTTAT
GTGATACCATGAAAGCATTCCTAATAAGAAAACTCATAGTTCTGAATGCA
TCCCAAGAAACTCGATAAAAATACCCTATCAGCTTGTTCGACATCTTGAA
GTCTTGAACAAAAAAAAACTTTTACCCCCCGAGGGGATACCGCGGGAAAA
ACCAATCTCGTCTGAG

Query= MSMg01no432_c22.b1 MSMg01no432_c22.b1 CHROMAT_FILE:
MSMg01no432_c22.b1 PHD_FILE: MSMg01no432_c22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:55:48 2005
         (493 letters)



>mm_chr1_112393297_112394188
          Length = 892

 Score =  872 bits (451), Expect = 0.0
 Identities = 479/489 (97%), Gaps = 3/489 (0%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattctatcaatgagacattttctatttatgaattaaatatgttatagatatttaatat 64
           ||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||
Sbjct: 207 gaattctatcaatgagacattttctatttatgaattaaat--gttatagatatttaatat 264

                                                                       
Query: 65  ttaataagataagtaaatatttaatgggtcctttaaagcaatgaagcattaccattattc 124
           |||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 265 ttaataagataagtaaatatttaatgggtcctttaaagcaatgaagcagtactattattc 324

                                                                       
Query: 125 tagaaactatcttcatattttaattatttaaaaatacatctttgttcatgcacatcttaa 184
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 325 tagaaactatcttcatattttaattatttaaaaatacatctttgttcatgcacatcgtaa 384

                                                                       
Query: 185 taaaatttttgtgttttcaaagtgacaatcaacacaaagaccagtagtgaagtaaatatt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 taaaatttttgtgttttcaaagtgacaatcaacacaaagaccagtagtgaagtaaatatt 444

                                                                       
Query: 245 ctaagggtaattgaatcttgaaagctttaaacattatgatttgatatctcccgttgaaaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 445 ctaagggtaattgaatcttgaaagctttaaacattatgatttgatatcttccattgaaaa 504

                                                                       
Query: 305 ctgaggctattgtaatttcagtgacctgagtcagctcagtttgatatcagaacattaaca 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ctgaggctattgtaatttcagtgacctgagtcagctcagtttgatatcagaacattaaca 564

                                                                       
Query: 365 tatattagctaaggagtgaacatcatattgctcctcttattaaaatatgcttatatctcc 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tatattagctaaggagtgaacatcatattgctcctcttattaaaatatgcttatatctcc 624

                                                                       
Query: 425 attaaaataaaaagcattagaaaacaaaaaagcaaaacttacaaaaaactatacctaata 484
           ||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||
Sbjct: 625 attaaaataaaaagcattagaaaacaaaaaagcaaaactta-aaaatactatacataata 683

                    
Query: 485 taaatatgc 493
           |||||||||
Sbjct: 684 taaatatgc 692


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 493
Length of database: 892
Length adjustment: 10
Effective length of query: 483
Effective length of database: 882
Effective search space:   426006
Effective search space used:   426006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)