Query= MSMg01no432_i15.b1 MSMg01no432_i15.b1 CHROMAT_FILE:
MSMg01no432_i15.b1 PHD_FILE: MSMg01no432_i15.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:18 2005
(466 letters)
>mm_chr1_44271103_44271967
Length = 865
Score = 779 bits (403), Expect = 0.0
Identities = 443/459 (96%), Gaps = 8/459 (1%)
Strand = Plus / Minus
Query: 5 gaattcttctaaag-aacccatcaatgaaatgtggcagaattgtgctaattttcacatca 63
|||||||||||||| || |||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 gaattcttctaaagaaaagcatcaatgaaatgtggcagaattgtgctaattttcacatca 437
Query: 64 catttgcaatctcttttgttctcaggagaacaagaacacgtggtagattttaaatccctg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 catttgcaatctcttttgttctcaggagaacaagaacacgtggtagattttaaatccctg 377
Query: 124 tcaggaaagattaatagctttaaaatggtacaaaatattttgtatgaaaaagctctaagg 183
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 376 tcaggaaagattaatagctttaaaatggtacagaatattttgtatgaaaaagctctaagg 317
Query: 184 tagacaaacctgggataataacatagttgtaaaacaattccttgattatgtattttatat 243
||||||||||||||||||||||||||||||||| ||||||||||||||| |||| ||||
Sbjct: 316 tagacaaacctgggataataacatagttgtaaagcaattccttgattatatatt--atat 259
Query: 244 atatatataacttcgctactttgactagcctgtgatattttactaatctgagttttttgt 303
|| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 258 atgtataaaacttcgctactttgactagcctgtgatattttactaatctgagtttttt-- 201
Query: 304 tttgttttgttttgttttgttttactaaaatagaacactcataagattccagagctggtt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 200 --tgttttgttttgttttgttttactaaaatagaacactcataagattccagagctggtt 143
Query: 364 ttgcttgagaaaaacagtgactcctcaggccacagttttttgtggccaatatacaatgtc 423
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 142 ttgcttgagaaaaacagtgac-cctcaggccacagttttttgtggccaatatacaatgtc 84
Query: 424 tgtgggaggtgtgtgactcacaaacagctctgggatgct 462
|||||||||||||||||||| ||||||||||||||||||
Sbjct: 83 tgtgggaggtgtgtgactcataaacagctctgggatgct 45
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 466
Length of database: 865
Length adjustment: 10
Effective length of query: 456
Effective length of database: 855
Effective search space: 389880
Effective search space used: 389880
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_i15.g1 MSMg01no432_i15.g1 CHROMAT_FILE:
MSMg01no432_i15.g1 PHD_FILE: MSMg01no432_i15.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:18 2005
(423 letters)
>mm_chr1_44121487_44122309
Length = 823
Score = 810 bits (419), Expect = 0.0
Identities = 422/423 (99%)
Strand = Plus / Plus
Query: 1 agagtgactctaggattctgagtggactttgtatagtttctctgtgcagtacctgttttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agagtgactctaggattctgagtggactttgtatagtttctctgtgcagtacctgttttt 260
Query: 61 tgtagatcctttagatctgtgctgagagatgcctgtgttttggaacctaattctgtgtca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgtagatcctttagatctgtgctgagagatgcctgtgttttggaacctaattctgtgtca 320
Query: 121 gtttctcttccagagagatgggaaatattttttatgctatgatacatacccactttctta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttctcttccagagagatgggaaatattttttatgctatgatacatacccactttctta 380
Query: 181 gataccttagtgttttctgagtcaaagggctccgtaactgaacagacaacagaccccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gataccttagtgttttctgagtcaaagggctccgtaactgaacagacaacagaccccaag 440
Query: 241 cctaccttggaagtgctttgttgaaggagttcttgcacgtcacgtgtctttttctggaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cctaccttggaagtgctttgttgaaggagttcttgcacgtcacgtgtctttttctggaaa 500
Query: 301 gtatcctgcttcatgagaaatatggcatgctctttggaacttgaaatatttgttttcttg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatcctgcttcatgagaaatatggcatgctctttggaacttgaaatatttgttttcttg 560
Query: 361 ggtcctcctcttctgggtggaattgaaagtgcatgtttgatagagtctttcaaaactcct 420
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 ggtcctcctcttctgggtggaattgaaagtgcatgtttgatggagtctttcaaaactcct 620
Query: 421 tgc 423
|||
Sbjct: 621 tgc 623
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 423
Length of database: 823
Length adjustment: 9
Effective length of query: 414
Effective length of database: 814
Effective search space: 336996
Effective search space used: 336996
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|