Query= MSMg01no432_k07.b1 MSMg01no432_k07.b1 CHROMAT_FILE:
MSMg01no432_k07.b1 PHD_FILE: MSMg01no432_k07.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:26 2005
(455 letters)
>mm_chr1_67950619_67951472
Length = 854
Score = 837 bits (433), Expect = 0.0
Identities = 447/455 (98%), Gaps = 8/455 (1%)
Strand = Plus / Plus
Query: 5 gaattccatgaaaatttcaca----gttgaaggaaatgaatcaaacagttcatgacatga 60
|||||||||||||| |||| |||||||||||||||||||||||||||||||||||
Sbjct: 204 gaattccatgaaaa---cacaaacagttgaaggaaatgaatcaaacagttcatgacatga 260
Query: 61 aagtggaacttgaatcaataaaggaataaacatggagtcccagtcagagttgggctctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aagtggaacttgaatcaataaaggaataaacatggagtcccagtcagagttgggctctgc 320
Query: 121 tttccccttcttgcctggcaggtggatgccctgagggaagcccagatcccagaaactccc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttccccttcttgcctggcaggtggatgccctgagggaagcccagatcccagaaactccc 380
Query: 181 acccacattacaactctcagtagtacaccagtggtgcctgggtagacaggagactgggag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccacattacaactctcagtagtacaccagtggtgcctgggtagacaggagactgggag 440
Query: 241 ctacagcaactgttccagactccactgtttcccactccaggaaaacctggactgagaacc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctacagcaactgttccagactccactgtttcccactccaggaaaacctggactgagaacc 500
Query: 301 acaattgcggactgcattttgcatcccctgagcatcatgttggtggcactccaggtgctc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acaattgcggactgcattttgcatcccctgagcatcatgttggtggcactccaggtgctc 560
Query: 361 tagcgggaagcaggacacaggccagcataaaaaccctagtgaaatagagccactaattaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagcgggaagcaggacacaggccagcataaaaaccctagtgaaatagagccactaattaa 620
Query: 421 aaacctcaacgggggggggggcagaaatatggttt 455
|||||||||||||||||||| ||||||||||||||
Sbjct: 621 aaacctcaacgggggggggg-cagaaatatggttt 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 854
Length adjustment: 10
Effective length of query: 445
Effective length of database: 844
Effective search space: 375580
Effective search space used: 375580
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no432_k07.g1 MSMg01no432_k07.g1 CHROMAT_FILE:
MSMg01no432_k07.g1 PHD_FILE: MSMg01no432_k07.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:56:26 2005
(448 letters)
>mm_chr1_68121440_68122287
Length = 848
Score = 861 bits (445), Expect = 0.0
Identities = 445/445 (100%)
Strand = Plus / Minus
Query: 1 caacccgagaaatccccgatttactggagaaaggagagcgtctgcctcagcctcccatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 645 caacccgagaaatccccgatttactggagaaaggagagcgtctgcctcagcctcccatct 586
Query: 61 gcactattgatgtttacatggtcatggtcaaatgtaaggctgcaaaatcactctttctgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 585 gcactattgatgtttacatggtcatggtcaaatgtaaggctgcaaaatcactctttctgc 526
Query: 121 ctgcattatcattcttaataaataaaagtttagattgttttacctgcaaaatgtttctct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 525 ctgcattatcattcttaataaataaaagtttagattgttttacctgcaaaatgtttctct 466
Query: 181 gaattgttaaatagagtagcaagaatatttacgaatgcagaatataaatacatgttgtgg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 465 gaattgttaaatagagtagcaagaatatttacgaatgcagaatataaatacatgttgtgg 406
Query: 241 taattactattatgaggtaatagtatgccactaagttacaaagtaaaaattatgtcgttc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 405 taattactattatgaggtaatagtatgccactaagttacaaagtaaaaattatgtcgttc 346
Query: 301 ttactcttacaatttttcaaatttccataccctttgaagtttgtcataaagagagataat 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 345 ttactcttacaatttttcaaatttccataccctttgaagtttgtcataaagagagataat 286
Query: 361 tattcataagaatgttagtaataatattaatgttaatctttatgggaaaatagctaaaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 285 tattcataagaatgttagtaataatattaatgttaatctttatgggaaaatagctaaaca 226
Query: 421 tcattgagagtctgaaaatgaatta 445
|||||||||||||||||||||||||
Sbjct: 225 tcattgagagtctgaaaatgaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 448
Length of database: 848
Length adjustment: 10
Effective length of query: 438
Effective length of database: 838
Effective search space: 367044
Effective search space used: 367044
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
