Query= MSMg01no433_b13.b1 MSMg01no433_b13.b1 CHROMAT_FILE:
MSMg01no433_b13.b1 PHD_FILE: MSMg01no433_b13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:05 2005
(455 letters)
>mm_chr1_87576954_87577808
Length = 855
Score = 835 bits (432), Expect = 0.0
Identities = 447/452 (98%)
Strand = Plus / Minus
Query: 4 ggaattctctgactacctaaatagtagagagtgtatggactataaagatgctttcatgat 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 ggaattctctgactacctaaatagtagagagtgtatggactataaagatgctttcatgat 596
Query: 64 cttttctgtcaggatggagatcctgagtcctttagtcctctctgcaaatcatcccacaaa 123
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 595 cttttctgtcaggatggagatcctgagtcctttaatcctctctgcaaatcatcccacgaa 536
Query: 124 ttcaatatgtagggactgatgggtctggcatagatgtaataatacaaatgtaaaatgtaa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 ttcaatatgtagggactgatgggtctggcatagatgtaataatacaaatgtaaaatgtaa 476
Query: 184 caaatataataaaaagaacactgcctttcaactacaattattccaccaagccccaattca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 caaatataataaaaagaacactgcctttcaactacaattattccaccaagccccaattca 416
Query: 244 taataattttgaatgaaaaaaaaaataggacatggctgcttctccgtgtggttaagcggg 303
||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 415 taataattttgaatggaaaaaaaaataggacatggctgcttctcggtgtggttaagcggg 356
Query: 304 atccttgcagaccatgtagggagagcattgtcaggggcatttggaagactgtagatggaa 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 atccttgcagaccatgtagggagagcattgtcaggggcatttggaagactgtagatggaa 296
Query: 364 aatggccagcaggctgaaagggtcctgagaggaggtggtagcaggagccagagaacagag 423
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 295 aatggccagcaggctgaaagggtcctgagaggaggtgggagcaggagccagagaacagag 236
Query: 424 aggtggggcaagtgcaccaagaaatatccagg 455
||||||||||||||||||||||||||||||||
Sbjct: 235 aggtggggcaagtgcaccaagaaatatccagg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_b13.g1 MSMg01no433_b13.g1 CHROMAT_FILE:
MSMg01no433_b13.g1 PHD_FILE: MSMg01no433_b13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:05 2005
(429 letters)
>mm_chr1_87501681_87502509
Length = 829
Score = 733 bits (379), Expect = 0.0
Identities = 415/427 (97%), Gaps = 2/427 (0%)
Strand = Plus / Plus
Query: 1 atagcgtgtgtctgtcttaccttcgctagcctgagtagagatttaataatgtattgatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atagcgtgtgtctgtcttaccttcgctagcctgagtagagatttaataatgtattgatct 260
Query: 61 ttccaaaggatgtgagcataatgcccacttcttttaattctatggatttctactttaatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttccaaaggatgtgagcataatgcccacttcttttaattctatggatttctactttaatt 320
Query: 121 tcactgaatctttgtcttcatttggatgaaatcattcctcataagattgttcatttatgc 180
||| |||||||||||||||||| ||||||||||| |||||||||||||||||||||||||
Sbjct: 321 tcattgaatctttgtcttcattgggatgaaatcactcctcataagattgttcatttatgc 380
Query: 181 ctctcttagcttccaacacatacaaagctgtatgtttcccattagccactgcctttgctg 240
|||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 381 ctctcttagcttccgacacatacaaagctgtatgtttccccttagccactgcctttgctg 440
Query: 241 tgtctcagatttaataatttttagacttcagggcttttttagtgtaggagaaagggtcac 300
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 441 tgtctcagatttaataatttttagacttcagtgcttttttagtgtaggagaaagggtcac 500
Query: 301 acttttgcttgtcttaccccatgtaaaaaaaattacattcatttatttattgtatgtgtg 360
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 501 ccttttgcttgtcttaccccatttaaaaaaaattacattcatttatttattgtatgtgtg 560
Query: 361 caggtgccacaatgtgtcttttgagatcagaggacaacattgggga-ttcggttgtctcc 419
|||||||||||||||||||||||||||||||||||||| ||||||| || |||| |||||
Sbjct: 561 caggtgccacaatgtgtcttttgagatcagaggacaactttggggagtt-ggttctctcc 619
Query: 420 tactacc 426
|||||||
Sbjct: 620 tactacc 626
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 429
Length of database: 829
Length adjustment: 9
Effective length of query: 420
Effective length of database: 820
Effective search space: 344400
Effective search space used: 344400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
