XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCCTTCT
TTATGTCCTCTACCATCATCATGAGATATGCTTTTAAATCCAGGTCTACC
TTTTCAGGTGTGTTAGGGTGTCCTGGATTGGGCGAAGTGGGCGTTCTGGG
TTCTGATGATGGTGAGTGGTCCTGGCTTCTGTTAGTAGGATTCTTACGTT
TACCTTTCGCCATCTGGCAATCTCTGGAGTTAGTTGTTATAGTTGTCTTT
GTTAAAAGATTGTTCCTCTGTTGATTTTGTTACCCTCTATCAGCAGGCGT
GGGAGACTTTTTCTCTTCTCTGAGTTTCAGTGGTCAGAGCAGTCTCTGTA
GGCAAGCTCTCCTCTCTCAGGGAAGGTGTACAGTTATCTGGTGTTTGGAC
CTCCTCCTGGCTGAAGGTGAAGGCCCAAAACAGGATCTTTCCCAGAAGCT
GTGTTGCTTTGGCCAGGAAGGTGGTCAGTTGTCTGGAGTCGAAGATGTCG
CAGCCTCTCAAGTTCTGTGGTTCTTGCCCTGAAAGTGGCTGGTTGTCTGT
AGCTGTAGATGTGCCTTTCCATTATTCCTGTTACTTCTTTCCCCTGCCCA
TAATGGTTGTTTTTTGTATTCTCCACGATTCTCCTTGTGCCTGCCTTTTC
CCGTCTCTCGTATTCCCTATTTTCCCTCCCTCGCTCTCCTATTACCCTCT
CTTTCTTTTCACCCCCCGTTTTTCCTCCTATTGCTCTTTTTCCG

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXAACATCACACCAGAGGATTTCCAAATGCATTCCC
TAAAATTTAACTTAAATCAAGGGGACTTAAAATCTCCCCAAAGGAGGGCC
TAGAATCCTGGAATGAGGTGTTTCAATTCATTCATTGATCTTATTGATAA
ATATTTCAGACCCAGACATCTGGACCTGTGGTACCTGTTTTGCTCACAAA
AGGCAAGACCAGGAAGGCTATCTTTTGTCCCTATCATTCCTCCCCATGAT
AGCTGTCATCAAGCTATTCATAGGGAAATCACCCAAGCTTAGCAATGACC
CATTACAGGAGGAAAACATAGGAGGATAAAGGGGAAGAAGACCCTGAGTA
TAGTCAATTGGTGGATCTAGTAGTTATAGAAAGGGCAGTTGACTTAATTA
GGCAGAAGTTACTCCCTAACCCACAATACCATCCCCACTTTACCCTACTC
TCCCACCTTACAAGGCCTCATTGTCTACNGAGGACAAAGAACTAAAAATT
ACGAACAAGATTCCCCCAAACACAGAGAATAGCCTCCTCCAACCTCATTG
CCCCACTTATGGAATCTCTATAATTTTGAGATGTAAAAAAAAATTTTCCT
AAGTTTTCCCCTTAACCATCCCCTGGGTTAAAGGTGTCTGGGGCTAAAAA
CCCTTCCCTCAAAGACTTGTCGGGGTAAACCTAATTGTTTTTAAAAAAAN

Query= MSMg01no433_d19.g1 MSMg01no433_d19.g1 CHROMAT_FILE:
MSMg01no433_d19.g1 PHD_FILE: MSMg01no433_d19.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:16 2005
         (439 letters)



>mm_chr1_144028822_144029660
          Length = 839

 Score =  826 bits (427), Expect = 0.0
 Identities = 436/439 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aacatcacaccagaggatttccaaatgcattccctaaaatttaacttaaatcaaggggac 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aacatcacaccagaggatttccaaatgcattccctaaaatttaacttaaatcaaggggac 260

                                                                       
Query: 61  ttaaaatctccccaaaggagggcctagaatcctggaatgaggtgtttcaattcattcatt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaaaatctccccaaaggagggcctagaatcctggaatgaggtgtttcaattcattcatt 320

                                                                       
Query: 121 gatcttattgataaatatttcagacccagacatctggacctgtggtacctgttttgctca 180
           ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gatcttattgatggatatttcagacccagacatctggacctgtggtacctgttttgctca 380

                                                                       
Query: 181 caaaaggcaagaccaggaaggctatcttttgtccctatcattcctccccatgatagctgt 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caaaaggcaagaccaggaaggctatcttttgtccctatcattcctccccatgatagctgt 440

                                                                       
Query: 241 catcaagctattcatagggaaatcacccaagcttagcaatgacccattacaggaggaaaa 300
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 catcaagcaattcatagggaaatcacccaagcttagcaatgacccattacaggaggaaaa 500

                                                                       
Query: 301 cataggaggataaaggggaagaagaccctgagtatagtcaattggtggatctagtagtta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cataggaggataaaggggaagaagaccctgagtatagtcaattggtggatctagtagtta 560

                                                                       
Query: 361 tagaaagggcagttgacttaattaggcagaagttactccctaacccacaataccatcccc 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tagaaagggcagttgacttaattaggcagaagttactccctaacccacaataccatcccc 620

                              
Query: 421 actttaccctactctccca 439
           |||||||||||||||||||
Sbjct: 621 actttaccctactctccca 639


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space:   356900
Effective search space used:   356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)