Query= MSMg01no433_m05.b1 MSMg01no433_m05.b1 CHROMAT_FILE:
MSMg01no433_m05.b1 PHD_FILE: MSMg01no433_m05.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:57 2005
(477 letters)
>mm_chr1_72377278_72378154
Length = 877
Score = 876 bits (453), Expect = 0.0
Identities = 471/477 (98%)
Strand = Plus / Plus
Query: 1 tgaccttgaactcagagatcctcgtgcctcagcctgatgggtgttgggattaaaagcttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgaccttgaactcagagatcctcgtgcctcagcctgatgggtgttgggattaaaagcttg 260
Query: 61 catcaccactccagcaagaatctttgtatgtgaatttctccctaaattcatagtgatgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catcaccactccagcaagaatctttgtatgtgaatttctccctaaattcatagtgatgaa 320
Query: 121 gagattcttctaggagaactcaagggaattgaaatgaaagtaaataccgcccatagactg 180
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 321 gagattcttctaggagaactcaagggaattgaaatgaaagtaaataccacccatagactg 380
Query: 181 aatctgtgtgcctagcacacaagccttatgtagtcttagtgttaggttagttcagtgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatctgtgtgcctagcacacaagccttatgtagtcttagtgttaggttagttcagtgagc 440
Query: 241 tgtattattattgctctcatggttatctctactgttagcagtgtcttcaaggcctggaga 300
|||| | ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaggagcatttctctcatggttatctctactgttagcagtgtcttcaaggcctggaga 500
Query: 301 gatggctcagtggtgaagaacgtgaacaactgctagagcactagaagttggttcttagca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gatggctcagtggtgaagaacgtgaacaactgctagagcactagaagttggttcttagca 560
Query: 361 ccaagtcaggtggctcacagttgcctgttactctaggtcaagggcatctgatgccctctt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ccaagtcaggtggctcacagttgcctgttactctaggtcaagggcatctgatgccctctt 620
Query: 421 ccagtctctaggagcacctgtataaacatggcatgtatttactgcatacacacacac 477
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccagtctctaggagcacctgtataaacatggcatgtatttactgcatacacacacac 677
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 877
Length adjustment: 10
Effective length of query: 467
Effective length of database: 867
Effective search space: 404889
Effective search space used: 404889
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no433_m05.g1 MSMg01no433_m05.g1 CHROMAT_FILE:
MSMg01no433_m05.g1 PHD_FILE: MSMg01no433_m05.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:57:57 2005
(286 letters)
>mm_chr1_72512943_72513627
Length = 685
Score = 491 bits (254), Expect = e-143
Identities = 275/282 (97%), Gaps = 1/282 (0%)
Strand = Plus / Minus
Query: 1 ttatagaacatctccctgaattggaggcaggggggggcatggggggaaagggggcactta 60
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct: 481 ttatagaacatctccctggattggaggcaggggggggcatggggggagagggggcactta 422
Query: 61 tgtgggaagggggctgtaattagaggcaactttaatttctaatcaatcattagttctaag 120
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 421 tgtgggaagggggctgtaattagaggaaactttaatttctaatcaatcattagttctaag 362
Query: 121 atatggctttcctctcccaccccagcctctgagcaggtgtattgacatggtaggaagact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 atatggctttcctctcccaccccagcctctgagcaggtgtattgacatggtaggaagact 302
Query: 181 tgtcttaaaaaaaacctaaagaccagcaaagctctacaaagagtggctgaaatgtgaaat 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 301 tgtctt-aaaaaaacctaaagaccagcaaagctctacaaagagtggctgaaatgtgaaat 243
Query: 241 gatttttgatgtgagaatgggatctaaatataggacttttca 282
||| ||||||||||||||||||||||||||||||||||||
Sbjct: 242 gatcaatgatgtgagaatgggatctaaatataggacttttca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
