XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAA
AGAAAACTCTTAGGGAATTAAAATTTTTGACCGCATGAAATTTATATTAA
AAAATCTATTTTACAGTAGTTTTCACAAGGCTACTTCTTGGACTTGTGTA
AATAAACTTAGGTTTTCCAGTGTGTTCTACATTTTCCCTCTAATTTATGT
TCTGACATTAAAATATTACAAAAATCATGTAATTTGATTGCATGTATGAA
TTTACATAAATTTGGCCTGTCTATACTTGTGTTGATTGTATATTAACTGT
TCGCCAAAGTGCAATATAAAAAAGTACATCTATTTCATATAAATACTTTA
ATATCTTAGGTGTTACAAGAGTAATATTATAATAAATATAGTTAATTTCT
GTTTTGAGACTTGATTCTCTTCTAGCTGAAGAAATTTTTTCATAGAATAT
AGTGTTTAATGTTTGGAGGGGGCAATTGTTATATGGATAAGGTTCAGTTA
AAATATTACACTATTATTCACTTATTAAACGTTATTTGAACTTATCTTTT
ATATAAAAAAGTTTATGATATTCTTGCCGTTGAACCTGTCATCATTTTGT
TCATACGTCCATCCTCCCTATCTTATCCCCTTTTGCATGCCTATTCATTC
CCTCCTGTGTCCAATAATTCTACCTCTCGTGAACTCTTTCCGGGTACATA
TTTCATCTTTTTCCCCTCCCTTCCAAACGGCTCTTCCGATCATTTTTCTT
TTTTTTTATTTTTTATATC

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXCCACTTCAAGAGCAGGGAGGCTGGAGTGGGTTGTTAGGTG
TGGGAACACTCTCCTCCCAGCAGGAGGAAGGGGAATGCCCATCAGCCTCG
CCCCCCCCCCNNCCCGGCCCCCCCCCCGCCCCCGCCCTCCCCCCCCCTCC
TCCCGCCCCCCCCCCCCCCCCCCCCCCTCCCCTCCCCCCCCCCCCCCCCC
CCCCTCCCCCCCCCCCTCTCTCTTCCCTCCCCTCCCCCCCCCCCTCCTCC
NTCCCTCCCCCCCCCNCCCCCCTTTTTTCTTCCNNCCCCCGCTCCGNNCC
TCCCCCCCCCCCCCCCCCTCCCCCCCCCTCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCTTCCTTCCCCCCCTCCT
CCGCTCCCCTTCCCTCCCCCCCCCTTCCCCCCCCCCCCCCCTCCCCTCCC
CCCCCCCCCCTCCCCCTCCCCCCCCTTCCCCCCCCCCTCCCTCTCCTCCC
CTCCCCCTCTCTTCCTCCTCCCCCCCCCCCTCCCCCCTTCCCTCTCCCCT
CCCCCCCCTCCCCCCTCCTCCCCCCCCTCCTTCCCTTCCCCCCTCCTCCC
CCCTCCCCCCTCCCCCCCTCCCCTCCCCCCCCCTTCCTCCCTCTCCTCCA
CTTCCTCTCCCTCTCCCCTGTCCCCCTTTCCTCCCCCCCCCTCTCCCCCT
CCCTCTTTCCTCCCTCCCCCCCTCCCCCTGCCCCCCCCCTCCATCCTCCC
CCCCCTCTCCCTG

Query= MSMg01no434_h04.b1 MSMg01no434_h04.b1 CHROMAT_FILE:
MSMg01no434_h04.b1 PHD_FILE: MSMg01no434_h04.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:58:52 2005
         (453 letters)



>mm_chr1_68438676_68439528
          Length = 853

 Score =  861 bits (445), Expect = 0.0
 Identities = 448/449 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcaaagaaaactcttagggaattaaaatttttgaccgcatgaaatttatattaaaa 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaaagaaaacttttagggaattaaaatttttgaccgcatgaaatttatattaaaa 264

                                                                       
Query: 65  aatctattttacagtagttttcacaaggctacttcttggacttgtgtaaataaacttagg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 aatctattttacagtagttttcacaaggctacttcttggacttgtgtaaataaacttagg 324

                                                                       
Query: 125 ttttccagtgtgttctacattttccctctaatttatgttctgacattaaaatattacaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttttccagtgtgttctacattttccctctaatttatgttctgacattaaaatattacaaa 384

                                                                       
Query: 185 aatcatgtaatttgattgcatgtatgaatttacataaatttggcctgtctatacttgtgt 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 aatcatgtaatttgattgcatgtatgaatttacataaatttggcctgtctatacttgtgt 444

                                                                       
Query: 245 tgattgtatattaactgttcgccaaagtgcaatataaaaaagtacatctatttcatataa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgattgtatattaactgttcgccaaagtgcaatataaaaaagtacatctatttcatataa 504

                                                                       
Query: 305 atactttaatatcttaggtgttacaagagtaatattataataaatatagttaatttctgt 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 atactttaatatcttaggtgttacaagagtaatattataataaatatagttaatttctgt 564

                                                                       
Query: 365 tttgagacttgattctcttctagctgaagaaattttttcatagaatatagtgtttaatgt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tttgagacttgattctcttctagctgaagaaattttttcatagaatatagtgtttaatgt 624

                                        
Query: 425 ttggagggggcaattgttatatggataag 453
           |||||||||||||||||||||||||||||
Sbjct: 625 ttggagggggcaattgttatatggataag 653


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 453
Length of database: 853
Length adjustment: 10
Effective length of query: 443
Effective length of database: 843
Effective search space:   373449
Effective search space used:   373449
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)