XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTC
TTTGTTTAGCTCAGTGCCCCATTTTTTAATGGGGTTATTTGATTATCTGG
AGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAATCCCCTATCT
GATTTAGGATTGATAAAGATCCTTTCCCAATCTGTTGGTGGCCTTTTTGT
CTTATTCACAGTGTCTTTTGCCTTATAGGAGCTTTGCAATTTTATGAGGT
CCCATTTGTCAATTCTCGATCTTGCAGCACAAGCCATTGCTCTTCAGTTC
AGGAATTTTCCCTTTTGCCCATATCTAAGAGGCTTTTCCATACTTCCTCC
TCTATAAGTTTTAGTGTCTCTGGTTTTATGTGGAGTTCCTTGATCCACTT
AAACTTGAGCTTTGTACAAGGAGATAGGAATGGATCAATTCGCATTCTTC
TACATGATAACCTCCAGTTGTGCCAGCACCATTTGTTGAAAATGCTATCT
TTTTTTCACTGAATGGTTTTAGCTCCTTTGTCAAATATCAAGTGACCATA
GGTGTGTGGGTTCAATTCTAGGTCTTCAATTCTGTTGCTCTGGTCTATCT
GTCTGTTGCTTTACCAGTACCTTGTAGTTTTTATCACAATTGCTCTGAGT
ACAGCTTTGAGTCAGGCATGGTGATTCCACCCAGATTCTTTTATCTTTTA
AAAAAATTTTTCCATGCCTAGGCTTTTGTTTTCCCGAAGAAATTTGCAAT
TGCCCCTTTTATTCCCTGGAGAATAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTAATTTCAATGTATACTTCTTTTTTTCCCTA
ATTTTTTGTTTATTTTTAAACTACTATTTAACTATTACAACTCAGATAGT
CCTGTGATTTGATAGTGAGAGAAGTGAATTGGCCTGAGCCCCGCTGATTC
CACGACAGGCTGCTAATTAGGAGAAGTTCAGCAGACCAGGCCTGAGCTTC
TACTTTCCAGAATTGGGCAAGTCAGTTACCGGAACAACTTCAGACTTATT
TAAAATGGACCTCTCCCCAGATTGTAAAAGGCCAAACTTGTGGCCGAGTC
GTCAAGAGCTACCCCTCCTTGGCATGAAGCAAGAATAGTCAAGAATGCTT
GAAACAAGACCCTAAACAATGATAACATCTCTCAGACCCCCAGAGATAGA
ACCCACCAATCAAGCTGTGGATCTTCTACCCCTCCCTAATATTTCTCCTT
TGGACTTTAAATCTGAATCTCCAAAATCAGTTTTGGGCCTTCCATCCCTA
TGGAATTGGGCCACTGGATACTGGAATTTGTTCCATAACCGCTCTTTGCC
TTTGGATACCGGTTAAACCGGGTTATCACCCCCCTCGGATCTCCAACCCC
AACTCTTTTTTTTTTTCTAAACTTTTTCCTCCACCTCTCTTGTCTTACTC
TCGTTTCTTCCTTCTTTACAATGGGGGGGGTTGGCCCTTTCCCACCCCTC
GTTCTTGTCTTTCCACCTCTTCCTTACTTC

Query= MSMg01no435_a22.g1 MSMg01no435_a22.g1 CHROMAT_FILE:
MSMg01no435_a22.g1 PHD_FILE: MSMg01no435_a22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:59:39 2005
         (454 letters)



>mm_chr1_47549479_47550332
          Length = 854

 Score =  816 bits (422), Expect = 0.0
 Identities = 446/454 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttaatttcaatgtatacttctttttttccctaattttttgtttatttttaaactactatt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttaatttcaatgtatacttctttttttccctaattttttgtttatttttaaactactatt 260

                                                                       
Query: 61  taactattacaactcagatagtcctgtgatttgatagtgagagaagtgaattggcctgag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taactattacaactcagatagtcctgtgatttgatagtgagagaagtgaattggcctgag 320

                                                                       
Query: 121 ccccgctgattccacgacaggctgctaattaggagaagttcagcagaccaggcctgagct 180
           ||  ||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 321 ccaggctaattccatgacaggctgctaattaggagaagttcaggagaccaggcctgagct 380

                                                                       
Query: 181 tctactttccagaattgggcaagtcagttaccggaacaacttcagacttatttaaaatgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctactttccagaattgggcaagtcagttaccggaacaacttcagacttatttaaaatgg 440

                                                                       
Query: 241 acctctccccagattgtaaaaggccaaacttgtggccgagtcgtcaagagctacccctcc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acctctccccagattgtaaaaggccaaacttgtggccgagtcgtcaagagctacccctcc 500

                                                                       
Query: 301 ttggcatgaagcaagaatagtcaagaatgcttgaaacaagaccctaaacaatgataacat 360
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 501 ttggcatgaagcaagaatagtcaagaatgcttgaaacaagaccctaaccaatgataacat 560

                                                                       
Query: 361 ctctcagacccccagagatagaacccaccaatcaagctgtggatcttctacccctcccta 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cactcagacccccagagatagaacccaccaatcaagctgtggatcttctacccctcccta 620

                                             
Query: 421 atatttctcctttggactttaaatctgaatctcc 454
           ||||||||| ||||||||||||||||||||||||
Sbjct: 621 atatttctcttttggactttaaatctgaatctcc 654


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space:   374736
Effective search space used:   374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)