NNCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTGTTTTGCTCTGAGCCCCATTTTTAATGGGGTTATTTGAT
TTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGATATTAGTCC
CCTATCTGATTTAGAATAAGTAAAGATCCTTTCCCAATCTGTTGGTGGCC
TTTTTGTCTTATTGACGGTGTCTTTTGCCTTGCAGAAGCTTTGCAATTTT
ATGAGGTCCCATTTGTCGATTCTCGATCTTACAGCACAAGCCCCTGCTGT
TCTATTCAGGAATTTTTCCCCTGTATCCATATCTTCGAGGCTTTTTCCCA
CTTTGTCCTCTATAAGTTTCACTGTCTCTGGTTTTATGTGGAGTTCCTTG
ATCCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGTTCAATTCC
CATTCTTCTACATGTTAACCACCAGTTGTGCCAGCACCATTTGTTGAAAA
TGCTGTCTTTTTTCCACTGGGTGGTTTTAGCTCCCTTGTCATAGATCAAG
TGATCATAGGTCAGTGGGTTCATCTCTGGGTCTTCAATTCTGTTCCATTG
TTCCTCTTGTTTGTCATTATACCAGTATCTTGCTGTTTTTATTCACCATT
GTTCTGTTTTTTAAGTTTTTTTTTTCCCGTTTTGTAGACTTTCCCCTTAA
TTCACTCTTTTTCCTTTGTTAACAATCTTTCTGCTGTTCTCTCGCGTTTT
TTTTTTTTTG

NNTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXCAACAGGATGTTAACAACTTTTC
CCTGAGGCGACCGCTGCTAGCTTTCTCTCCGCCCCTCGGAGGTGGGAGAC
CGCTAGTACTGCGCTACAGCTACAGCTCCTATTGGTGGAGGCTCCAAAAC
TCCTCCGCCCATGTCAGCCCACACGAGGAGCCCTTTGGTTCCAGCAACCA
TTCAGGGAAGGTCTCTATTGAGCCCAGGCACCAGTCCCCAATCCTCTGCA
GTCGGTTTGATGCGCTGGGCAAAGCTGGACTAAGGAGTCTCATCTGGAAA
AGAGGGTCCACGAAAAAGGCCAAAAGAAGCGCCAAAAGGAGGCTGCAGTT
TGGAAAAGGGACAAGGGTGGCGCGGTTTGGACATCTTTTTGCGTTGCTGG
GCGCGCGGAGTGCCTCTCTTGCTTCGCCACCTATCCACAGTTCATGCAAC
CACGGGCACATCTCCTGCCCCAGAGCCCAAGTCCCTGAATAATGGAAGTT
TCTAACCTCTCAGGCGCCACTCCCGGCCTTGCCTTTCCTCCGGGACACGA
GAGCTGCAGTGACAGCCCAAGTTCCGGCAGGAGTATGGTATCCACCCCAA
GTGTTTCTCATTTTTGCCTGGTCGCGAGCCGCCCTTCTCTGCTTTCCCCG
TGGCTTGTGGTGCCCCTCACTGTGTGTTTTGGATTCCTTCCCCCTT

Query= MSMg01no436_i18.g1 MSMg01no436_i18.g1 CHROMAT_FILE:
MSMg01no436_i18.g1 PHD_FILE: MSMg01no436_i18.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:39 2005
         (514 letters)



>mm_chr1_123424642_123425555
          Length = 914

 Score =  965 bits (499), Expect = 0.0
 Identities = 513/523 (98%), Gaps = 9/523 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   aacaggatgttaacaacttttccctgaggcgaccgctgctagctttctctccgcccctcg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597 aacaggatgttaacaacttttccctgaggcgaccgctgctagctttctctccgcccctcg 538

                                                                       
Query: 61  gaggtgggagaccgctagtactgcgctacagctacagctcctattggtggaggctccaaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537 gaggtgggagaccgctagtactgcgctacagctacagctcctattggtggaggctccaaa 478

                                                                       
Query: 121 actcctccgcccatgtcagcccacacgaggagccctttggttccagcaaccattcaggga 180
           |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 477 actcctccgcccatttcagcccacacgaggagccctttggttccagcaaccattcaggga 418

                                                                       
Query: 181 aggtctctattgagcccaggcaccagtccccaatcctctgcagtcggtttgatgcgctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 417 aggtctctattgagcccaggcaccagtccccaatcctctgcagtcggtttgatgcgctgg 358

                                                                       
Query: 241 gcaaagctggactaaggagtctcatctggaaaagagggtccacgaaaaaggccaaaagaa 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 gcaaagctggactaaggagtctcatctggaaaagagggtccacgaaaaaggccaaaagaa 298

                                                                       
Query: 301 gcgccaaaaggaggctgcagtttggaaaagggacaagggtggcgcggtttggacatcttt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 gcgccaaaaggaggctgcagtttggaaaagggacaagggtggcgcggtttggacatcttt 238

                                                                       
Query: 361 ttgcgttgctgggcgcgcggagtgcc---------tctcttgcttcgccacctatccaca 411
           ||||||||||||||||||||||||||         |||||||||||||||||||||||||
Sbjct: 237 ttgcgttgctgggcgcgcggagtgcctctcttgcttctcttgcttcgccacctatccaca 178

                                                                       
Query: 412 gttcatgcaaccacgggcacatctcctgccccagagcccaagtccctgaataatggaagt 471
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 177 gttcatgcaaccacgggcacatctcctgccccagagcccaagtccctgaataatggaagt 118

                                                      
Query: 472 ttctaacctctcaggcgccactcccggccttgcctttcctccg 514
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 117 ttctaacctctcaggcgccactcccggccttgcctttcctccg 75


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 514
Length of database: 914
Length adjustment: 10
Effective length of query: 504
Effective length of database: 904
Effective search space:   455616
Effective search space used:   455616
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)