NAACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCTTTCCACTACCCAGGGGAAGGGCCTGTGACCTCACTAGGGGC
TTCGTGGGTGATCAGGTCGCCTTGCACGCTGCCAGTGTGCTGAGATCCCA
CACCCTAAAAAGGCATTAATTGTGTTCAGGAAGGCTCCTGCCTCAGATGG
TGGCACTCACCCAGGGGCTGAAGTCATTTGGACCCTGTATGGAACATTCT
CCTGTGTGGCTGCCCTGCTGGGGTGAAGCACTTGAATCGCAGGAATTTCA
ATGTATTAATAGACCCTGCCATTTGCAATAAATAGCTGCCTTTGCCCGAC
CTTCACCTCTCATGGCACTGAGCTTTGAGAGGCCCTGCACACCCCTGGAG
TAACAGAACGCATATGAGGGAGGGGTCTCCCTGTGAGAGACAGGCAGTGG
TGGGCTGTGCCCCACAGATGAAAACAAAAAAAATGAACAAAAGGTTGAAG
ATGTGTCTCAGGAAAGCAGAAAATCAGCTAGGCTAGTCCACCCTCCCACC
CCTCAACCCTCATGCTCCCACCCCACACCCACACCCCACTCCCCACCCTC
CCACCCCACTCCACCCCACACCCTCACATCTTACCACTCACCCTCCCAAC
CCCACCCTCCATCCCATCCTCATTCTTCAACCCAAATCTATCCCCCATAC
TCCATCTTCCTACCCTCTCATCCTTATACTACTCCACTGTTCCCTCTTTT
TCTN

CGATGATGTGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXAGCTTGTACTCTAGTACTACAGAACAT
AGCAAACCCCAGGCCGGAACATGGTGACCTCTCACACTGCAGCACCTCTC
TGCTCACTACACTCAGCTTATCTGAACCTCGTACTCCAATCTATGTCTGA
AAAGCTGAAACTAGCTACATAGAAATCCCATTTTTCACATAAGAATTGTG
TAAAGATTTCACATAGTTTTTTACAAGTGTAATGAACTTTGAAATAGTGG
CAATAAACTTTTTCTGGACAATATTTTTCAAATGGACTTATTAATGATGA
TTTATAAATGGACATGACCACATTTTTTTAAATTCAAAATACAGCTTGGA
GTCTTGAGTAATAATTTTGAAATGAAGTTTATAAGCATAAAACATACATA
CAGATTTTAATATCTATCTGTTGTCACCAGCTTTTAAAGGACTATCAGAA
TACTTAAAGGGTTAGGTCCAATTACAAAGCTGTCTGATTGTATTACCCTC
AGCTTTTTCCAAATTGCTGTAGAACTTCCTCTGATGAAGGGTCCTCATAC
TTTCCAAAGACTTTCTGTAGGATCAAGAACAGGAGAAAAATCAACAATAA
AATTATGCCCAATATTATAGTCCAGACAAACTTAGCTAGCAATATTCTTT
ATTACTATATTAATCATTTCATAACTTACTCGGCATATTATATAAGTATC
CCT

Query= MSMg01no436_j03.b1 MSMg01no436_j03.b1 CHROMAT_FILE:
MSMg01no436_j03.b1 PHD_FILE: MSMg01no436_j03.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:41 2005
         (522 letters)



>mm_chr1_92911940_92912861
          Length = 922

 Score =  978 bits (506), Expect = 0.0
 Identities = 515/518 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gggcctgtgacctcactaggggcttcgtgggtgatcaggtcgccttgcacgctgccagtg 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gggcctgtgacctcactaggggcttcgtgggtgatcaggtcgccttgcacgctgccagtg 264

                                                                       
Query: 65  tgctgagatcccacaccctaaaaaggcattaattgtgttcaggaaggctcctgcctcaga 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgctgagatcccacaccctaaaaaggcattaattgtgttcaggaaggctcctgcctcaga 324

                                                                       
Query: 125 tggtggcactcacccaggggctgaagtcatttggaccctgtatggaacattctcctgtgt 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tggtggcactcacccaggggctgaagtcatttggaccctgtatggaacattctcctgtgt 384

                                                                       
Query: 185 ggctgccctgctggggtgaagcacttgaatcgcaggaatttcaatgtattaatagaccct 244
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ggctgccctgctggggcgaagcacttgaatcgcaggaatttcaatgtattaatagaccct 444

                                                                       
Query: 245 gccatttgcaataaatagctgcctttgcccgaccttcacctctcatggcactgagctttg 304
           ||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gccaggtgcaataaatagctgcctttgcccgaccttcacctctcatggcactgagctttg 504

                                                                       
Query: 305 agaggccctgcacacccctggagtaacagaacgcatatgagggaggggtctccctgtgag 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 agaggccctgcacacccctggagtaacagaacgcatatgagggaggggtctccctgtgag 564

                                                                       
Query: 365 agacaggcagtggtgggctgtgccccacagatgaaaacaaaaaaaatgaacaaaaggttg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 agacaggcagtggtgggctgtgccccacagatgaaaacaaaaaaaatgaacaaaaggttg 624

                                                                       
Query: 425 aagatgtgtctcaggaaagcagaaaatcagctaggctagtccaccctcccacccctcaac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aagatgtgtctcaggaaagcagaaaatcagctaggctagtccaccctcccacccctcaac 684

                                                 
Query: 485 cctcatgctcccaccccacacccacaccccactcccca 522
           ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 cctcatgctcccaccccacacccacaccccactcccca 722


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 522
Length of database: 922
Length adjustment: 10
Effective length of query: 512
Effective length of database: 912
Effective search space:   466944
Effective search space used:   466944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no436_j03.g1 MSMg01no436_j03.g1 CHROMAT_FILE:
MSMg01no436_j03.g1 PHD_FILE: MSMg01no436_j03.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 19:01:41 2005
         (547 letters)



>mm_chr1_93066459_93067405
          Length = 947

 Score = 1027 bits (531), Expect = 0.0
 Identities = 543/547 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   agcttgtactctagtactacagaacatagcaaaccccaggccggaacatggtgacctctc 60
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 agcttgtactctagtacaacagaacatagcaaaccccaggccggaacatggtgacctctc 688

                                                                       
Query: 61  acactgcagcacctctctgctcactacactcagcttatctgaacctcgtactccaatcta 120
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 687 acactgcagcacctctctgctcactacactcagcttatctgaaccccgtactccaatcta 628

                                                                       
Query: 121 tgtctgaaaagctgaaactagctacatagaaatcccatttttcacataagaattgtgtaa 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 tgtctgaaaagctgaaactagctacatagaaatcccatttttcacataagaattgtgtaa 568

                                                                       
Query: 181 agatttcacatagttttttacaagtgtaatgaactttgaaatagtggcaataaacttttt 240
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 567 agatttcacatagttttttacatgtgtaatgaactttgaaatagtggcaataaacttttt 508

                                                                       
Query: 241 ctggacaatatttttcaaatggacttattaatgatgatttataaatggacatgaccacat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ctggacaatatttttcaaatggacttattaatgatgatttataaatggacatgaccacat 448

                                                                       
Query: 301 ttttttaaattcaaaatacagcttggagtcttgagtaataattttgaaatgaagtttata 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ttttttaaattcaaaatacagcttggagtcttgagtaataattttgaaatgaagtttata 388

                                                                       
Query: 361 agcataaaacatacatacagattttaatatctatctgttgtcaccagcttttaaaggact 420
           | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 aacataaaacatacatacagattttaatatctatctgttgtcaccagcttttaaaggact 328

                                                                       
Query: 421 atcagaatacttaaagggttaggtccaattacaaagctgtctgattgtattaccctcagc 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 atcagaatacttaaagggttaggtccaattacaaagctgtctgattgtattaccctcagc 268

                                                                       
Query: 481 tttttccaaattgctgtagaacttcctctgatgaagggtcctcatactttccaaagactt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tttttccaaattgctgtagaacttcctctgatgaagggtcctcatactttccaaagactt 208

                  
Query: 541 tctgtag 547
           |||||||
Sbjct: 207 tctgtag 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 547
Length of database: 947
Length adjustment: 10
Effective length of query: 537
Effective length of database: 937
Effective search space:   503169
Effective search space used:   503169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)